RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Fam109bQ14B98 259 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Adgrg5Q3V3Z3 524 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Olfr876Q7TRE4 310 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Gm5111Q8C9M4 190 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Vmn1r233Q8R294 319 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Rbpms2Q8VC52 206 aaKnown RBP8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Prodh2Q8VCZ9 456 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Zmat5Q9CQR5 170 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Rer1Q9CQU3 196 aaKnown RBP8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Lamb2Q61292 1799 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Cep250Q60952 2414 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Gm13090A2A899 111 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Tpsb2P21845 276 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Rpl30P62889 115 aaKnown RBP8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Defb4P82019 63 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Dhrs2Q149L0 282 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Wfdc21Q8BTE6 63 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Nfam1Q8R4V1 264 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Xrcc3Q9CXE6 349 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Fbxo25Q9D2Y6 357 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Gm12728V9GX31 77 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Ighv1-42A0A0A6YY38 117 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Grem1O70326 184 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 PpicP30412 212 aaKnown RBP8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Slc17a2Q5SZA1 478 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Gm10277Q6R5C6 214 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Olfr1295Q8VF48 312 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Ppp1r1aQ9ERT9 171 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Plin4O88492 1403 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Ighv14-4A0A0A6YVR1 117 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 6330409D20RikA2AK85 162 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Gpr183Q3U6B2 357 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Tmem158Q6F5E0 286 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Ceacam9Q78T27 234 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Urm1Q9D2P4 101 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Cacna1gQ5SUF7 2381 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Pitx3O35160 302 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Timp1P12032 205 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 MlanaQ2TA50 113 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Acp1Q9D358 158 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Ly96Q9JHF9 160 aa8.56□□□□□ -1.04
Syne1-201ENSMUST00000041639 Ssc4dA1L0T3 586 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Olfr1029A2ATE0 324 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Slc18b1D3Z5L6 459 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Olfr432E9Q8M2 312 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Olfr178E9Q9T3 319 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Mmp9P41245 730 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Olfr1028Q7TR89 324 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Phf13Q8K2W6 296 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Rab11fip5Q8R361 645 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Olfr490Q8VFD2 314 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Olfr983Q8VG90 315 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Neurl1Q923S6 574 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Cmtm2bQ9DAC0 210 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Q9DAF8 208 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 PhipQ8VDD9 1821 aaKnown RBP8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Fer1l5P0DM40 2038 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Trav5-1A0A075B5Z7 114 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Ighv9-1A0A0B4J1P3 117 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Trav12-2A0N8N6 114 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Adamtsl5D3Z689 485 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Gm6904E9PVF1 202 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Saa1P05366 122 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 G6pcP35576 357 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Vmn1r181Q0P547 304 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Npy4rQ61041 375 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Tmem212Q8C6V3 187 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Rab1bQ9D1G1 201 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 CymB7ZWD6 379 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 GferP56213 198 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 SrstQ06666 185 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Q5BN45 167 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Rgs13Q8K443 158 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Utp23Q9CX11 249 aaKnown RBP8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Rnase4Q9JJH1 148 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 PdfS4R2K0 231 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Fer1l6E0CZ42 1862 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Trav6n-7A0A075B6A6 116 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Samt3A2ARK7 233 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 SpxD3Z752 116 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Hist1h1eP43274 219 aaKnown RBP8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Vax1Q2NKI2 338 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Rnf7Q9WTZ1 113 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 AicdaQ9WVE0 198 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 FAM186AQ9D9R9 1790 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Megf6Q80V70 1572 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Cyb561d1A2AE42 229 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Olfr715bE9Q725 315 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Gm20939L7N243 523 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Rom1P32958 351 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Olfr802Q8VGJ2 312 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Cela1Q91X79 266 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Zfand6Q9DCH6 223 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Icam4Q9ERM2 262 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Paqr4Q9JJE4 273 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 PoleQ9WVF7 2283 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Ighv5-17A0A075B5R1 117 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Olfr1191-ps1A0A1L1STD5 311 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Olfr1328B1ARV2 313 aa8.55□□□□□ -1.04
Syne1-201ENSMUST00000041639 Gm9376G3UW68 176 aa8.55□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms