RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 RNASE3P12724 160 aaKnown RBP1.23□□□□□ -2.21
CDR1-202ENST00000625883 SPI1P17947 270 aa1.23□□□□□ -2.21
CDR1-202ENST00000625883 HIST1H3AP68431 136 aa1.23□□□□□ -2.21
CDR1-202ENST00000625883 H3F3AP84243 136 aa1.23□□□□□ -2.21
CDR1-202ENST00000625883 SIGLECL1Q8N7X8 197 aa1.23□□□□□ -2.21
CDR1-202ENST00000625883 OR5A1Q8NGJ0 315 aa1.23□□□□□ -2.21
CDR1-202ENST00000625883 C10orf105Q8TEF2 133 aa1.23□□□□□ -2.21
CDR1-202ENST00000625883 TLNRD1Q9H1K6 362 aa1.23□□□□□ -2.21
CDR1-202ENST00000625883 MED9Q9NWA0 146 aa1.23□□□□□ -2.21
CDR1-202ENST00000625883 PCDH15Q96QU1 1955 aa1.22□□□□□ -2.21
CDR1-202ENST00000625883 A0A0D9SG52 128 aa1.22□□□□□ -2.21
CDR1-202ENST00000625883 OR5F1O95221 314 aa1.22□□□□□ -2.21
CDR1-202ENST00000625883 KRTAP10-4P60372 401 aaPredicted RBP1.22□□□□□ -2.21
CDR1-202ENST00000625883 C10orf55Q5SWW7 151 aa1.22□□□□□ -2.21
CDR1-202ENST00000625883 OR6V1Q8N148 313 aa1.22□□□□□ -2.21
CDR1-202ENST00000625883 KRT222Q8N1A0 295 aa1.22□□□□□ -2.21
CDR1-202ENST00000625883 HIST3H2BBQ8N257 126 aa1.22□□□□□ -2.21
CDR1-202ENST00000625883 OR51A2Q8NGJ7 313 aa1.22□□□□□ -2.21
CDR1-202ENST00000625883 ITFG2Q969R8 447 aa1.22□□□□□ -2.21
CDR1-202ENST00000625883 CCDC90BQ9GZT6 254 aa1.22□□□□□ -2.21
CDR1-202ENST00000625883 NCOA1Q15788 1441 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 BRWD1Q9NSI6 2320 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 MED13Q9UHV7 2174 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 LAMB2P55268 1798 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 hCG_1818297A0A087WSY0 165 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 A8MT66 165 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 PDE6DO43924 150 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 SERPINE1P05121 402 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 COX6A1P12074 109 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 SURF2Q15527 256 aaPredicted RBP1.21□□□□□ -2.22
CDR1-202ENST00000625883 LINC01554Q52M75 96 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 KHDC3LQ587J8 217 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 DPPA3Q6W0C5 159 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 OR4E2Q8NGC2 313 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 OR52L1Q8NGH7 329 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 OR4D11Q8NGI4 311 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 REG4Q9BYZ8 158 aa1.21□□□□□ -2.22
CDR1-202ENST00000625883 SOX21Q9Y651 276 aaPredicted RBP1.21□□□□□ -2.22
CDR1-202ENST00000625883 HELZ2Q9BYK8 2649 aaKnown RBP1.2□□□□□ -2.22
CDR1-202ENST00000625883 RHEBQ15382 184 aa1.2□□□□□ -2.22
CDR1-202ENST00000625883 OOSP2Q86WS3 158 aa1.2□□□□□ -2.22
CDR1-202ENST00000625883 AQP3Q92482 292 aa1.2□□□□□ -2.22
CDR1-202ENST00000625883 SERPINI1Q99574 410 aa1.2□□□□□ -2.22
CDR1-202ENST00000625883 SIGMAR1Q99720 223 aa1.2□□□□□ -2.22
CDR1-202ENST00000625883 SLC50A1Q9BRV3 221 aa1.2□□□□□ -2.22
CDR1-202ENST00000625883 RIC1Q4ADV7 1423 aa1.2□□□□□ -2.22
CDR1-202ENST00000625883 IGKV2-40A0A087WW87 121 aaPredicted RBP1.19□□□□□ -2.22
CDR1-202ENST00000625883 TRAV14DV4A0A0A6YYC5 116 aa1.19□□□□□ -2.22
CDR1-202ENST00000625883 OR2T1O43869 369 aa1.19□□□□□ -2.22
CDR1-202ENST00000625883 TCL1BO95988 128 aa1.19□□□□□ -2.22
CDR1-202ENST00000625883 IGKV2D-40P01614 121 aaPredicted RBP1.19□□□□□ -2.22
CDR1-202ENST00000625883 IFNA6P05013 189 aa1.19□□□□□ -2.22
CDR1-202ENST00000625883 C8GP07360 202 aa1.19□□□□□ -2.22
CDR1-202ENST00000625883 ARL14EPLP0DKL9 152 aa1.19□□□□□ -2.22
CDR1-202ENST00000625883 DEFA3P59666 94 aa1.19□□□□□ -2.22
CDR1-202ENST00000625883 MIXL1Q9H2W2 232 aa1.19□□□□□ -2.22
CDR1-202ENST00000625883 OSTCQ9NRP0 149 aa1.19□□□□□ -2.22
CDR1-202ENST00000625883 MYOFQ9NZM1 2061 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 COL4A5P29400 1685 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 IGKV3-7A0A075B6H7 116 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 FUOMA2VDF0 154 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 TMEM210A6NLX4 147 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 HCRTO43612 131 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 OR7C1O76099 320 aaPredicted RBP1.18□□□□□ -2.22
CDR1-202ENST00000625883 ASAH2BP0C7U1 165 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 SMIM17P0DL12 118 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 PPIBP23284 216 aaKnown RBP1.18□□□□□ -2.22
CDR1-202ENST00000625883 S100A4P26447 101 aaKnown RBP1.18□□□□□ -2.22
CDR1-202ENST00000625883 Q6Q795 121 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.18□□□□□ -2.22
CDR1-202ENST00000625883 LINC00471Q8N535 108 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 SLC25A40Q8TBP6 338 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 ADAT3Q96EY9 351 aaPredicted RBP1.18□□□□□ -2.22
CDR1-202ENST00000625883 C2orf50Q96LR7 162 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 TRAV1-1A0A0B4J248 108 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 C19orf84I3L1E1 186 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 MIFP14174 115 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 CASP1P29466 404 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 REEP5Q00765 189 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 SPA17Q15506 151 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 LCA10Q71F78 164 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 TRAPPC6BQ86SZ2 158 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 WFDC5Q8TCV5 224 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 DGCR14Q96DF8 476 aaKnown RBP1.18□□□□□ -2.22
CDR1-202ENST00000625883 KRTAP4-1Q9BYQ7 146 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 OR5AC2Q9NZP5 309 aa1.18□□□□□ -2.22
CDR1-202ENST00000625883 HEATR5BQ9P2D3 2071 aa1.17□□□□□ -2.22
CDR1-202ENST00000625883 ZNF106Q9H2Y7 1883 aaKnown RBP1.17□□□□□ -2.22
CDR1-202ENST00000625883 C2orf70A6NJV1 201 aa1.17□□□□□ -2.22
CDR1-202ENST00000625883 SRIP30626 198 aa1.17□□□□□ -2.22
CDR1-202ENST00000625883 YPEL3P61236 119 aaPredicted RBP1.17□□□□□ -2.22
CDR1-202ENST00000625883 AKIRIN2Q53H80 203 aa1.17□□□□□ -2.22
CDR1-202ENST00000625883 SPANXN5Q5MJ07 72 aa1.17□□□□□ -2.22
CDR1-202ENST00000625883 LINC00311Q8N616 119 aa1.17□□□□□ -2.22
CDR1-202ENST00000625883 C12orf29Q8N999 325 aa1.17□□□□□ -2.22
CDR1-202ENST00000625883 OR13D1Q8NGV5 346 aa1.17□□□□□ -2.22
CDR1-202ENST00000625883 TAS2R4Q9NYW5 299 aa1.17□□□□□ -2.22
CDR1-202ENST00000625883 TVP23BQ9NYZ1 205 aa1.17□□□□□ -2.22
CDR1-202ENST00000625883 MICAL3Q7RTP6 2002 aa1.16□□□□□ -2.22
CDR1-202ENST00000625883 RTL1A6NKG5 1358 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms