RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ACTL6BO94805 426 aa12.51□□□□□ -0.41
CD40-207ENST00000620709 IFNA10P01566 189 aa12.51□□□□□ -0.41
CD40-207ENST00000620709 IGF1P05019 195 aa12.51□□□□□ -0.41
CD40-207ENST00000620709 MRGPRG-AS1Q2M3A8 158 aa12.51□□□□□ -0.41
CD40-207ENST00000620709 C9orf66Q5T8R8 295 aa12.51□□□□□ -0.41
CD40-207ENST00000620709 ALKAL2Q6UX46 152 aa12.51□□□□□ -0.41
CD40-207ENST00000620709 SCARB1Q8WTV0 552 aa12.51□□□□□ -0.41
CD40-207ENST00000620709 C4orf3Q8WVX3 66 aa12.51□□□□□ -0.41
CD40-207ENST00000620709 ATP5SQ99766 215 aa12.51□□□□□ -0.41
CD40-207ENST00000620709 FBXL15Q9H469 300 aa12.51□□□□□ -0.41
CD40-207ENST00000620709 NDUFA4L2Q9NRX3 87 aa12.51□□□□□ -0.41
CD40-207ENST00000620709 OR8U8P0C7N1 319 aa12.5□□□□□ -0.41
CD40-207ENST00000620709 PSMB8P28062 276 aa12.5□□□□□ -0.41
CD40-207ENST00000620709 TNXAQ16473 311 aa12.5□□□□□ -0.41
CD40-207ENST00000620709 HAPLN4Q86UW8 402 aa12.5□□□□□ -0.41
CD40-207ENST00000620709 LILRB2Q8N423 598 aa12.5□□□□□ -0.41
CD40-207ENST00000620709 RNF152Q8N8N0 203 aa12.5□□□□□ -0.41
CD40-207ENST00000620709 SLC24A4Q8NFF2 622 aa12.5□□□□□ -0.41
CD40-207ENST00000620709 OR11H1Q8NG94 326 aa12.5□□□□□ -0.41
CD40-207ENST00000620709 OR10P1Q8NGE3 313 aa12.5□□□□□ -0.41
CD40-207ENST00000620709 ABHD5Q8WTS1 349 aa12.5□□□□□ -0.41
CD40-207ENST00000620709 PINX1Q96BK5 328 aaKnown RBP12.5□□□□□ -0.41
CD40-207ENST00000620709 PRR25Q96S07 402 aa12.5□□□□□ -0.41
CD40-207ENST00000620709 KLK15Q9H2R5 256 aa12.5□□□□□ -0.41
CD40-207ENST00000620709 TRAV41A0A0B4J266 112 aa12.49□□□□□ -0.41
CD40-207ENST00000620709 INS-IGF2F8WCM5 200 aa12.49□□□□□ -0.41
CD40-207ENST00000620709 RPL27AP46776 148 aaKnown RBP12.49□□□□□ -0.41
CD40-207ENST00000620709 RAB11AP62491 216 aa12.49□□□□□ -0.41
CD40-207ENST00000620709 SLC38A11Q08AI6 406 aa12.49□□□□□ -0.41
CD40-207ENST00000620709 ARL16Q0P5N6 197 aa12.49□□□□□ -0.41
CD40-207ENST00000620709 PJVKQ0ZLH3 352 aa12.49□□□□□ -0.41
CD40-207ENST00000620709 ECSCRQ19T08 205 aa12.49□□□□□ -0.41
CD40-207ENST00000620709 C5orf64Q2M2E5 130 aa12.49□□□□□ -0.41
CD40-207ENST00000620709 OR8G2PQ6IF36 304 aa12.49□□□□□ -0.41
CD40-207ENST00000620709 EIF5AL1Q6IS14 154 aaKnown RBP12.49□□□□□ -0.41
CD40-207ENST00000620709 B9D2Q9BPU9 175 aa12.49□□□□□ -0.41
CD40-207ENST00000620709 GNB4Q9HAV0 340 aa12.49□□□□□ -0.41
CD40-207ENST00000620709 IGHV7-81A0A0B4J1V7 117 aa12.48□□□□□ -0.41
CD40-207ENST00000620709 PMS2P5A8MQ11 134 aa12.48□□□□□ -0.41
CD40-207ENST00000620709 HLA-DRB1P01911 266 aa12.48□□□□□ -0.41
CD40-207ENST00000620709 NPY1RP25929 384 aa12.48□□□□□ -0.41
CD40-207ENST00000620709 HTR2BP41595 481 aa12.48□□□□□ -0.41
CD40-207ENST00000620709 ATP5IP56385 69 aaPredicted RBP12.48□□□□□ -0.41
CD40-207ENST00000620709 ERHP84090 104 aaKnown RBP12.48□□□□□ -0.41
CD40-207ENST00000620709 ATP6V1FQ16864 119 aa12.48□□□□□ -0.41
CD40-207ENST00000620709 C10orf55Q5SWW7 151 aa12.48□□□□□ -0.41
CD40-207ENST00000620709 OR1N2Q8NGR9 330 aa12.48□□□□□ -0.41
CD40-207ENST00000620709 ARV1Q9H2C2 271 aa12.48□□□□□ -0.41
CD40-207ENST00000620709 TNCP24821 2201 aa12.48□□□□□ -0.41
CD40-207ENST00000620709 IFNA5P01569 189 aa12.47□□□□□ -0.41
CD40-207ENST00000620709 ZNF491Q8N8L2 437 aa12.47□□□□□ -0.41
CD40-207ENST00000620709 GINS3Q9BRX5 216 aa12.47□□□□□ -0.41
CD40-207ENST00000620709 CGB1A6NKQ9 187 aa12.47□□□□□ -0.41
CD40-207ENST00000620709 CA2P00918 260 aa12.47□□□□□ -0.41
CD40-207ENST00000620709 SNCAP37840 140 aa12.47□□□□□ -0.41
CD40-207ENST00000620709 RAB14P61106 215 aa12.47□□□□□ -0.41
CD40-207ENST00000620709 GNB1P62873 340 aa12.47□□□□□ -0.41
CD40-207ENST00000620709 SLC25A24Q6NUK1 477 aa12.47□□□□□ -0.41
CD40-207ENST00000620709 OR10W1Q8NGF6 305 aa12.47□□□□□ -0.41
CD40-207ENST00000620709 TMEM147Q9BVK8 224 aa12.47□□□□□ -0.41
CD40-207ENST00000620709 E7EUB6 86 aa12.46□□□□□ -0.42
CD40-207ENST00000620709 IFNA4P05014 189 aa12.46□□□□□ -0.42
CD40-207ENST00000620709 PPIFP30405 207 aaKnown RBP12.46□□□□□ -0.42
CD40-207ENST00000620709 RAB9AP51151 201 aa12.46□□□□□ -0.42
CD40-207ENST00000620709 BSXQ3C1V8 233 aa12.46□□□□□ -0.42
CD40-207ENST00000620709 C2orf83Q53S99 150 aa12.46□□□□□ -0.42
CD40-207ENST00000620709 HSD17B13Q7Z5P4 300 aaPredicted RBP12.46□□□□□ -0.42
CD40-207ENST00000620709 HSD17B11Q8NBQ5 300 aa12.46□□□□□ -0.42
CD40-207ENST00000620709 TMED6Q8WW62 240 aa12.46□□□□□ -0.42
CD40-207ENST00000620709 SRSF12Q8WXF0 261 aaKnown RBP12.46□□□□□ -0.42
CD40-207ENST00000620709 UBE2E2Q96LR5 201 aa12.46□□□□□ -0.42
CD40-207ENST00000620709 PARD6GQ9BYG4 376 aaPredicted RBP12.46□□□□□ -0.42
CD40-207ENST00000620709 ZNF580Q9UK33 172 aa12.46□□□□□ -0.42
CD40-207ENST00000620709 A0A1B0GW64 132 aa12.45□□□□□ -0.42
CD40-207ENST00000620709 FCN1O00602 326 aa12.45□□□□□ -0.42
CD40-207ENST00000620709 IGLV1-40P01703 118 aa12.45□□□□□ -0.42
CD40-207ENST00000620709 ZNF616Q08AN1 781 aa12.45□□□□□ -0.42
CD40-207ENST00000620709 FHL3Q13643 280 aa12.45□□□□□ -0.42
CD40-207ENST00000620709 NDUFA5Q16718 116 aa12.45□□□□□ -0.42
CD40-207ENST00000620709 SCGB1C1Q8TD33 95 aa12.45□□□□□ -0.42
CD40-207ENST00000620709 TMEM170AQ8WVE7 144 aa12.45□□□□□ -0.42
CD40-207ENST00000620709 SRSF8Q9BRL6 282 aaKnown RBP12.45□□□□□ -0.42
CD40-207ENST00000620709 UQCC1Q9NVA1 299 aa12.45□□□□□ -0.42
CD40-207ENST00000620709 FBXO7Q9Y3I1 522 aa12.45□□□□□ -0.42
CD40-207ENST00000620709 NBEAL2Q6ZNJ1 2754 aa12.45□□□□□ -0.42
CD40-207ENST00000620709 UBE2L5PA0A1B0GUS4 154 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 IGLC7A0M8Q6 106 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 CNIH1O95406 144 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 SEC11BP0C7V7 166 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 RNASE2P10153 161 aaKnown RBP12.44□□□□□ -0.42
CD40-207ENST00000620709 SPP1P10451 314 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 SUB1P53999 127 aaKnown RBP eCLIP12.44□□□□□ -0.42
CD40-207ENST00000620709 DLK1P80370 383 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 SSBP2P81877 361 aaPredicted RBP12.44□□□□□ -0.42
CD40-207ENST00000620709 NDPQ00604 133 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 WT1-ASQ06250 92 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 KIAA0141Q14154 515 aaPredicted RBP12.44□□□□□ -0.42
CD40-207ENST00000620709 CLLU1Q5K131 121 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 FAM74A1Q5RGS3 127 aa12.44□□□□□ -0.42
CD40-207ENST00000620709 GNPNAT1Q96EK6 184 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms