RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 FBXL15Q9H469 300 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 C7orf69Q9H7B7 122 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 PGPEP1Q9NXJ5 209 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 SERF1AO75920 110 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 TSPAN13O95857 204 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 LEPP41159 167 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 TMEM105Q8N8V8 129 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 OSR1Q8TAX0 266 aaPredicted RBP6.94□□□□□ -1.3
ALMS1-208ENST00000620466 ZNF106Q9H2Y7 1883 aaKnown RBP6.94□□□□□ -1.3
ALMS1-208ENST00000620466 MALP21145 153 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 GPR183P32249 361 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 TCF24Q7RTU0 167 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 ERASQ7Z444 233 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 UNC13CQ8NB66 2214 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 A0A0G2JRQ6 117 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 IZUMO1RA6ND01 250 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 SAA1P0DJI8 122 aaPredicted RBP6.94□□□□□ -1.3
ALMS1-208ENST00000620466 DUTP33316 252 aaKnown RBP6.94□□□□□ -1.3
ALMS1-208ENST00000620466 C1orf147Q96MC9 270 aaPredicted RBP6.94□□□□□ -1.3
ALMS1-208ENST00000620466 TMEM160Q9NX00 188 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 IGHV1-18A0A0C4DH31 117 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 A0A0G2JLM5 398 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 WIPF3A6NGB9 483 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 UPK2O00526 184 aa6.94□□□□□ -1.3
ALMS1-208ENST00000620466 NUP210Q8TEM1 1887 aaPredicted RBP6.93□□□□□ -1.3
ALMS1-208ENST00000620466 MDC1Q14676 2089 aaKnown RBP6.93□□□□□ -1.3
ALMS1-208ENST00000620466 H7C1H1 209 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 TDGF1P13385 188 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 CFAP161Q6P656 301 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 ZNF600Q6ZNG1 722 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 BEND2Q8NDZ0 799 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 TP53BP1Q12888 1972 aaPredicted RBP6.93□□□□□ -1.3
ALMS1-208ENST00000620466 FMC1Q96HJ9 113 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 GAGE10A6NGK3 116 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 M0R381 172 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 GPX4P36969 197 aaPredicted RBP6.93□□□□□ -1.3
ALMS1-208ENST00000620466 PRB3Q04118 309 aaPredicted RBP6.93□□□□□ -1.3
ALMS1-208ENST00000620466 Q6P435 159 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 C20orf204Q6ZNR8 217 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 COL4A3Q01955 1670 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 DENND4CQ5VZ89 1909 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 FAM90A9PA6NNJ1 464 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 SLC25A34Q6PIV7 304 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 OCC1Q8TAD7 63 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 DPH3P1Q9H4G8 78 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 TRBV24-1A0A075B6N3 115 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 TCRBV4S1A1TA0A5B7 111 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 DNAL4O96015 105 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 CSRP1P21291 193 aaKnown RBP6.93□□□□□ -1.3
ALMS1-208ENST00000620466 Q6ZS49 121 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 FAM19A2Q8N3H0 131 aa6.93□□□□□ -1.3
ALMS1-208ENST00000620466 TRBV6-6A0A0A6YYG2 114 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 TGFAP01135 160 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 GNG5P63218 68 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 C10orf91Q5T1B1 145 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 GTSCR1Q86UQ5 136 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 FOXA3P55318 350 aaPredicted RBP6.92□□□□□ -1.3
ALMS1-208ENST00000620466 EFNB3Q15768 340 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 LDLRAD2Q5SZI1 272 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 TMEM170BQ5T4T1 132 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 ZNF418Q8TF45 676 aaPredicted RBP6.92□□□□□ -1.3
ALMS1-208ENST00000620466 HS3ST6Q96QI5 342 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 CITED2Q99967 270 aaPredicted RBP6.92□□□□□ -1.3
ALMS1-208ENST00000620466 PMCHL2Q9BQD1 86 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 WDR83OSQ9Y284 106 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 AMBPP02760 352 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 PAX1P15863 534 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 SPSB3Q6PJ21 355 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 TREML4Q6UXN2 200 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 TRGV2A0A075B6R0 118 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 H3BRM9 83 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 ETV2O00321 342 aaPredicted RBP6.92□□□□□ -1.3
ALMS1-208ENST00000620466 PSPNO60542 156 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 IL18BPO95998 194 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 PLP1P60201 277 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 SPATA31B1PQ5VZV4 182 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 AGMATQ9BSE5 352 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 RPP21Q9H633 154 aaKnown RBP6.92□□□□□ -1.3
ALMS1-208ENST00000620466 FANCMQ8IYD8 2048 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 ACTL10Q5JWF8 245 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 SAPCD1Q5SSQ6 148 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 JMJD8Q96S16 334 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 NDUFAF3Q9BU61 184 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 DPM3Q9P2X0 92 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 METRNQ9UJH8 293 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 LINC00312Q9Y6C7 94 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 KNL1Q8NG31 2342 aa6.92□□□□□ -1.3
ALMS1-208ENST00000620466 K7ERU9 68 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 IGHV3-11P01762 117 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 NBEAP1P0C6P0 100 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 TMEM14EPQ6UXP3 125 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 C12orf54Q6X4T0 127 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 TMEM144Q7Z5S9 345 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 RPP25LQ8N5L8 163 aaKnown RBP6.91□□□□□ -1.3
ALMS1-208ENST00000620466 RNF166Q96A37 237 aaPredicted RBP6.91□□□□□ -1.3
ALMS1-208ENST00000620466 C14orf144Q96I85 54 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 UBE2DNLQ8IWF7 75 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 CD177Q8N6Q3 437 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 OR52E5Q8NH55 327 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 RNASEH2CQ8TDP1 164 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms