RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 PSMB11A5LHX3 300 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 FNDC10F2Z333 226 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 K7EIM0 57 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 OR2J3O76001 311 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 NDUFB8O95169 186 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 MT-CO2P00403 227 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 C4BPBP20851 252 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 OPRK1P41145 380 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 RAB9AP51151 201 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 SLC35B1P78383 322 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 RHOGP84095 191 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 SLC38A11Q08AI6 406 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 GAMTQ14353 236 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 CLINT1Q14677 625 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 OPCMLQ14982 345 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 VWC2Q2TAL6 325 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 TEX38Q6PEX7 206 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 ZNF329Q86UD4 541 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 NECAP1Q8NC96 275 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 LINC01006Q8NI28 216 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 VN1R17PQ8TDU5 208 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 SCARB1Q8WTV0 552 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 MS4A10Q96PG2 267 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 ARPC5LQ9BPX5 153 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 TMEM147Q9BVK8 224 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 KLK15Q9H2R5 256 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 SLA2Q9H6Q3 261 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 NPVFQ9HCQ7 196 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 FBXL17Q9UF56 701 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 FBXL7Q9UJT9 491 aa6.26□□□□□ -1.41
CPNE3-209ENST00000620393 BCL2L11O43521 198 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 JTBO76095 146 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 TRGV3P03979 118 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 ELANEP08246 267 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 PF4V1P10720 104 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 MDKP21741 143 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-209ENST00000620393 PSMB8P28062 276 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 SRSF2Q01130 221 aaKnown RBP6.25□□□□□ -1.41
CPNE3-209ENST00000620393 ATP5G2Q06055 141 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 FOXE3Q13461 319 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 KIAA0141Q14154 515 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-209ENST00000620393 ZNF266Q14584 549 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 SLC16A13Q7RTY0 426 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 TMEM144Q7Z5S9 345 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 LILRB2Q8N423 598 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 COMMD1Q8N668 190 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 RNF152Q8N8N0 203 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 TMEM116Q8NCL8 245 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 OR4F5Q8NH21 305 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 OR4X1Q8NH49 305 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 NPIPB3Q92617 1050 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 USMG5Q96IX5 58 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 SLC35E1Q96K37 410 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 ATP5SQ99766 215 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 UQCC1Q9NVA1 299 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 MAST4O15021 2626 aa6.25□□□□□ -1.41
CPNE3-209ENST00000620393 BORCS7-ASMTA0A0B4J1R7 106 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 IGHV3-21A0A0B4J1V1 117 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 A0A0G2JLM5 398 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 CLPSL1A2RUU4 121 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 FAM223BA6NKX1 122 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 IFNA5P01569 189 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 IGHV3-48P01763 117 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 MFAP4P55083 255 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 EIF5AP63241 154 aaKnown RBP6.24□□□□□ -1.41
CPNE3-209ENST00000620393 C15orf32Q32M92 178 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 RPL7L1Q6DKI1 246 aaKnown RBP6.24□□□□□ -1.41
CPNE3-209ENST00000620393 C10orf99Q6UWK7 81 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 SLC51BQ86UW2 128 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 FAM223AQ8IWN6 122 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 KLHDC1Q8N7A1 406 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 UBAC2Q8NBM4 344 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 OR5AU1Q8NGC0 362 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 SCGB1C1Q8TD33 95 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 WIPF2Q8TF74 440 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-209ENST00000620393 CXorf58Q96LI9 332 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 TXN2Q99757 166 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 ZNF471Q9BX82 626 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-209ENST00000620393 PARD6GQ9BYG4 376 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-209ENST00000620393 WDR61Q9GZS3 305 aaKnown RBP6.24□□□□□ -1.41
CPNE3-209ENST00000620393 ARV1Q9H2C2 271 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 C21orf62Q9NYP8 219 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 MRPL36Q9P0J6 103 aaKnown RBP6.24□□□□□ -1.41
CPNE3-209ENST00000620393 WDR83OSQ9Y284 106 aa6.24□□□□□ -1.41
CPNE3-209ENST00000620393 LSM4Q9Y4Z0 139 aaKnown RBP6.24□□□□□ -1.41
CPNE3-209ENST00000620393 TET2Q6N021 2002 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-209ENST00000620393 NSD1Q96L73 2696 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-209ENST00000620393 TRBV7-1A0A0A6YYK4 115 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 A0A1B0GUS0 222 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 SMCO3A2RU48 225 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 MFSD2BA6NFX1 497 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 MPDU1O75352 247 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 CLN5O75503 358 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 CLEC3BP05452 202 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 FCGR2BP31994 310 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-209ENST00000620393 NPBWR1P48145 328 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 RND2P52198 227 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 PROK1P58294 105 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 TPPP2P59282 170 aa6.23□□□□□ -1.41
CPNE3-209ENST00000620393 ACSM6Q6P461 480 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms