RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 CRYBB3P26998 211 aa12.26□□□□□ -0.45
CSNK1E-215ENST00000612795 PPP5CP53041 499 aa12.26□□□□□ -0.45
CSNK1E-215ENST00000612795 TMEM230Q96A57 120 aa12.26□□□□□ -0.45
CSNK1E-215ENST00000612795 RNF167Q9H6Y7 350 aa12.26□□□□□ -0.45
CSNK1E-215ENST00000612795 SCRT2Q9NQ03 307 aa12.26□□□□□ -0.45
CSNK1E-215ENST00000612795 TMED3Q9Y3Q3 217 aa12.26□□□□□ -0.45
CSNK1E-215ENST00000612795 TEX48A0A1B0GUV7 120 aa12.25□□□□□ -0.45
CSNK1E-215ENST00000612795 GPR31O00270 319 aa12.25□□□□□ -0.45
CSNK1E-215ENST00000612795 EBAG9O00559 213 aa12.25□□□□□ -0.45
CSNK1E-215ENST00000612795 SNCAP37840 140 aa12.25□□□□□ -0.45
CSNK1E-215ENST00000612795 AQP4P55087 323 aa12.25□□□□□ -0.45
CSNK1E-215ENST00000612795 HSPE1P61604 102 aaKnown RBP12.25□□□□□ -0.45
CSNK1E-215ENST00000612795 SPINK9Q5DT21 86 aa12.25□□□□□ -0.45
CSNK1E-215ENST00000612795 SLC25A38Q96DW6 304 aa12.25□□□□□ -0.45
CSNK1E-215ENST00000612795 NIPSNAP3BQ9BS92 247 aa12.25□□□□□ -0.45
CSNK1E-215ENST00000612795 FXYD6Q9H0Q3 95 aa12.25□□□□□ -0.45
CSNK1E-215ENST00000612795 AUNIPQ9H7T9 357 aa12.25□□□□□ -0.45
CSNK1E-215ENST00000612795 TXNL4BQ9NX01 149 aaKnown RBP12.25□□□□□ -0.45
CSNK1E-215ENST00000612795 IGHV3OR16-12A0A075B7B8 117 aa12.24□□□□□ -0.45
CSNK1E-215ENST00000612795 A0A0A6YYH2 397 aa12.24□□□□□ -0.45
CSNK1E-215ENST00000612795 A6NJ64 397 aa12.24□□□□□ -0.45
CSNK1E-215ENST00000612795 S100GP29377 79 aa12.24□□□□□ -0.45
CSNK1E-215ENST00000612795 RFX2P48378 723 aa12.24□□□□□ -0.45
CSNK1E-215ENST00000612795 SNRPD3P62318 126 aaKnown RBP12.24□□□□□ -0.45
CSNK1E-215ENST00000612795 PHLDA2Q53GA4 152 aa12.24□□□□□ -0.45
CSNK1E-215ENST00000612795 OR5H6Q8NGV6 325 aa12.24□□□□□ -0.45
CSNK1E-215ENST00000612795 NEU1Q99519 415 aa12.24□□□□□ -0.45
CSNK1E-215ENST00000612795 DIABLOQ9NR28 239 aa12.24□□□□□ -0.45
CSNK1E-215ENST00000612795 SMIM9A6NGZ8 99 aa12.23□□□□□ -0.45
CSNK1E-215ENST00000612795 CORTO00230 105 aa12.23□□□□□ -0.45
CSNK1E-215ENST00000612795 AP2S1P53680 142 aaPredicted RBP12.23□□□□□ -0.45
CSNK1E-215ENST00000612795 SCAND1P57086 179 aa12.23□□□□□ -0.45
CSNK1E-215ENST00000612795 FAM222AQ5U5X8 452 aa12.23□□□□□ -0.45
CSNK1E-215ENST00000612795 DHRS11Q6UWP2 260 aa12.23□□□□□ -0.45
CSNK1E-215ENST00000612795 ZNF705AQ6ZN79 300 aaPredicted RBP12.23□□□□□ -0.45
CSNK1E-215ENST00000612795 SLC35G3Q8N808 338 aa12.23□□□□□ -0.45
CSNK1E-215ENST00000612795 SEC22AQ96IW7 307 aa12.23□□□□□ -0.45
CSNK1E-215ENST00000612795 DKK2Q9UBU2 259 aa12.23□□□□□ -0.45
CSNK1E-215ENST00000612795 BLOC1S6Q9UL45 172 aa12.23□□□□□ -0.45
CSNK1E-215ENST00000612795 RFNGQ9Y644 331 aa12.23□□□□□ -0.45
CSNK1E-215ENST00000612795 APOBP04114 4563 aaKnown RBP12.22□□□□□ -0.45
CSNK1E-215ENST00000612795 ZNF705FA8MVS1 300 aaPredicted RBP12.22□□□□□ -0.45
CSNK1E-215ENST00000612795 CLN5O75503 358 aa12.22□□□□□ -0.45
CSNK1E-215ENST00000612795 PMP2P02689 132 aa12.22□□□□□ -0.45
CSNK1E-215ENST00000612795 ZNF705DP0CH99 300 aaPredicted RBP12.22□□□□□ -0.45
CSNK1E-215ENST00000612795 ZNF705BP0CI00 300 aaPredicted RBP12.22□□□□□ -0.45
CSNK1E-215ENST00000612795 OPRK1P41145 380 aa12.22□□□□□ -0.45
CSNK1E-215ENST00000612795 MXD1Q05195 221 aa12.22□□□□□ -0.45
CSNK1E-215ENST00000612795 TMEM88Q6PEY1 159 aa12.22□□□□□ -0.45
CSNK1E-215ENST00000612795 OR5H2Q8NGV7 314 aa12.22□□□□□ -0.45
CSNK1E-215ENST00000612795 MRGPRFQ96AM1 343 aa12.22□□□□□ -0.45
CSNK1E-215ENST00000612795 ATG101Q9BSB4 218 aa12.22□□□□□ -0.45
CSNK1E-215ENST00000612795 FAM90A26D6RGX4 464 aa12.21□□□□□ -0.45
CSNK1E-215ENST00000612795 H3BMM0 161 aa12.21□□□□□ -0.45
CSNK1E-215ENST00000612795 SUB1P53999 127 aaKnown RBP eCLIP12.21□□□□□ -0.45
CSNK1E-215ENST00000612795 FAM3BP58499 235 aaPredicted RBP12.21□□□□□ -0.45
CSNK1E-215ENST00000612795 TAS2R46P59540 309 aa12.21□□□□□ -0.45
CSNK1E-215ENST00000612795 IDNKQ5T6J7 187 aa12.21□□□□□ -0.45
CSNK1E-215ENST00000612795 C6orf223Q8N319 242 aa12.21□□□□□ -0.45
CSNK1E-215ENST00000612795 GLMPQ8WWB7 406 aa12.21□□□□□ -0.45
CSNK1E-215ENST00000612795 FAM212BQ9NTI7 297 aaPredicted RBP12.21□□□□□ -0.45
CSNK1E-215ENST00000612795 HERC1Q15751 4861 aa12.2□□□□□ -0.46
CSNK1E-215ENST00000612795 HLA-DRB4P13762 266 aa12.2□□□□□ -0.46
CSNK1E-215ENST00000612795 TIGITQ495A1 244 aa12.2□□□□□ -0.46
CSNK1E-215ENST00000612795 TBC1D26Q86UD7 250 aa12.2□□□□□ -0.46
CSNK1E-215ENST00000612795 OR6F1Q8NGZ6 308 aa12.2□□□□□ -0.46
CSNK1E-215ENST00000612795 PDCD10Q9BUL8 212 aa12.2□□□□□ -0.46
CSNK1E-215ENST00000612795 MRPL36Q9P0J6 103 aaKnown RBP12.2□□□□□ -0.46
CSNK1E-215ENST00000612795 SSR3Q9UNL2 185 aa12.2□□□□□ -0.46
CSNK1E-215ENST00000612795 HLA-DRB4X5D2U9 266 aa12.2□□□□□ -0.46
CSNK1E-215ENST00000612795 IGKV1-39P01597 117 aa12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 IGKV3-20P01619 116 aa12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 IGKV1D-39P04432 117 aa12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 HNRNPCP07910 306 aaKnown RBP eCLIP12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 PSMB9P28065 219 aa12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 SDC2P34741 201 aa12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 HOXA1P49639 335 aaPredicted RBP12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 FXYD7P58549 80 aa12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 OXA1LQ15070 435 aa12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 C16orf54Q6UWD8 224 aa12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 C15orf53Q8NAA6 179 aa12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 OR4X1Q8NH49 305 aa12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 YTHDF1Q9BYJ9 559 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 NRN1Q9NPD7 142 aa12.19□□□□□ -0.46
CSNK1E-215ENST00000612795 NBDYA0A0U1RRE5 68 aa12.18□□□□□ -0.46
CSNK1E-215ENST00000612795 RNASE2P10153 161 aaKnown RBP12.18□□□□□ -0.46
CSNK1E-215ENST00000612795 IZUMO4Q1ZYL8 232 aa12.18□□□□□ -0.46
CSNK1E-215ENST00000612795 FNDC4Q9H6D8 234 aaPredicted RBP12.18□□□□□ -0.46
CSNK1E-215ENST00000612795 SEPSECSQ9HD40 501 aaKnown RBP12.18□□□□□ -0.46
CSNK1E-215ENST00000612795 U3KQE9 123 aa12.18□□□□□ -0.46
CSNK1E-215ENST00000612795 TRAV30A0A087WSZ9 112 aa12.17□□□□□ -0.46
CSNK1E-215ENST00000612795 IGKV1-17P01599 117 aa12.17□□□□□ -0.46
CSNK1E-215ENST00000612795 CLEC2LP0C7M8 214 aa12.17□□□□□ -0.46
CSNK1E-215ENST00000612795 DAD1P61803 113 aa12.17□□□□□ -0.46
CSNK1E-215ENST00000612795 LPCAT3Q6P1A2 487 aa12.17□□□□□ -0.46
CSNK1E-215ENST00000612795 ENY2Q9NPA8 101 aa12.17□□□□□ -0.46
CSNK1E-215ENST00000612795 YTHDF2Q9Y5A9 579 aaKnown RBP12.17□□□□□ -0.46
CSNK1E-215ENST00000612795 DNAH5Q8TE73 4624 aa12.16□□□□□ -0.46
CSNK1E-215ENST00000612795 LOC102723971A0A1B0GUV8 181 aa12.16□□□□□ -0.46
CSNK1E-215ENST00000612795 INS-IGF2F8WCM5 200 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms