RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 STXBP6Q8NFX7 210 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 ABHD5Q8WTS1 349 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 SRSF12Q8WXF0 261 aaKnown RBP8.32□□□□□ -1.08
VPS25-203ENST00000589520 ANAPC16Q96DE5 110 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 EAF1Q96JC9 268 aaPredicted RBP8.32□□□□□ -1.08
VPS25-203ENST00000589520 UHRF2Q96PU4 802 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 TRGV9Q99603 122 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 CCL19Q99731 98 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 SSX3Q99909 188 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 TMPRSS5Q9H3S3 457 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 FBXL15Q9H469 300 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 DNAJC4Q9NNZ3 241 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 DOK5Q9P104 306 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 MLXQ9UH92 298 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 F11RQ9Y624 299 aaKnown RBP8.32□□□□□ -1.08
VPS25-203ENST00000589520 DOCK11Q5JSL3 2073 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 BOD1L1Q8NFC6 3051 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 CLDN34H7C241 214 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 HMGB3O15347 200 aaKnown RBP8.31□□□□□ -1.08
VPS25-203ENST00000589520 CNIH1O95406 144 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 C8orf88P0DMB2 117 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 PAX1P15863 534 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 HOXB4P17483 251 aaPredicted RBP8.31□□□□□ -1.08
VPS25-203ENST00000589520 ZFP36P26651 326 aaKnown RBP8.31□□□□□ -1.08
VPS25-203ENST00000589520 AKIRIN2Q53H80 203 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 GCSAMLQ5JQS6 135 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 ZNF562Q6V9R5 426 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 OR2T6Q8NHC8 308 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 FAM168AQ92567 244 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 RPUSD4Q96CM3 377 aaKnown RBP8.31□□□□□ -1.08
VPS25-203ENST00000589520 ACY3Q96HD9 319 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 SMIM7Q9BQ49 75 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 C20orf24Q9BUV8 137 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 BPESC1Q9GZL8 116 aa8.31□□□□□ -1.08
VPS25-203ENST00000589520 SEPSECSQ9HD40 501 aaKnown RBP8.31□□□□□ -1.08
VPS25-203ENST00000589520 IGKV1OR2-108A0A075B7D4 117 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 A0A1W2PRE2 83 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 C1orf196B1AJZ1 125 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 TEX22C9J3V5 150 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 NDUFS7O75251 213 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 IGHV4-39P01824 125 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 ARL14EPLP0DKL9 152 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 RAB5BP61020 215 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 C5orf64Q2M2E5 130 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 C10orf55Q5SWW7 151 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 CST9LP1Q5W188 147 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 CLEC2AQ6UVW9 174 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 S100A7AQ86SG5 101 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 Q8N6K4 173 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 NPIPB3Q92617 1050 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 HIST1H2BAQ96A08 127 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 BTF3L4Q96K17 158 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 TCEAL7Q9BRU2 100 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 SLC25A33Q9BSK2 321 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 TPSG1Q9NRR2 321 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 HILPDAQ9Y5L2 63 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 CENPEQ02224 2701 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 NF1P21359 2839 aa8.3□□□□□ -1.08
VPS25-203ENST00000589520 TRAV30A0A087WSZ9 112 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 NPIPB5A8MRT5 1133 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 PPP1R2P9O14990 202 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 COX7A2P2O60397 106 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 SCGB2A1O75556 95 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 CRYBA1P05813 215 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 CD99P14209 185 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 CTRB1P17538 263 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 CNTFRP26992 372 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 RND2P52198 227 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 PLP1P60201 277 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 GNB1P62873 340 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 LCN2P80188 198 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 PAX8Q06710 450 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 HES1Q14469 280 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 FXYD3Q14802 87 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 MLANAQ16655 118 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 C10orf113Q5VZT2 155 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 CTRB2Q6GPI1 263 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 LHFPL4Q7Z7J7 247 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 C1QL4Q86Z23 238 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 OR4X1Q8NH49 305 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 C10orf105Q8TEF2 133 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 TMEM68Q96MH6 324 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 PARLQ9H300 379 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 FNDC4Q9H6D8 234 aaPredicted RBP8.29□□□□□ -1.08
VPS25-203ENST00000589520 TNFRSF19Q9NS68 423 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 THYN1Q9P016 225 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 LY96Q9Y6Y9 160 aa8.29□□□□□ -1.08
VPS25-203ENST00000589520 TET2Q6N021 2002 aaPredicted RBP8.29□□□□□ -1.08
VPS25-203ENST00000589520 ABCA4P78363 2273 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 PSMB11A5LHX3 300 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 VWC2LB2RUY7 222 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 DEFA4P12838 97 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 TMEM11P17152 192 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 RAB5AP20339 215 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 DLX1P56177 255 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 LDLRAD2Q5SZI1 272 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 TTC9CQ8N5M4 171 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 C11orf52Q96A22 123 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 MISP3Q96FF7 219 aa8.28□□□□□ -1.08
VPS25-203ENST00000589520 PERPQ96FX8 193 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms