RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 CST9LP1Q5W188 147 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 PVRIGQ6DKI7 326 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 ETFRF1Q6IPR1 90 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 PRSS57Q6UWY2 283 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 PQLC2Q6ZP29 291 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 KIR3DL3Q8N743 410 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 OR4P4Q8NGL7 312 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 OR1L4Q8NGR5 311 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 ABHD5Q8WTS1 349 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 C22orf15Q8WYQ4 148 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 C11orf52Q96A22 123 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 RPEQ96AT9 228 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 BTF3L4Q96K17 158 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 UHRF2Q96PU4 802 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 OR5B12Q96R08 314 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 CCL19Q99731 98 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 SRSF8Q9BRL6 282 aaKnown RBP8.01□□□□□ -1.13
VPS25-202ENST00000589219 UBTD1Q9HAC8 227 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 TECRQ9NZ01 308 aaKnown RBP8.01□□□□□ -1.13
VPS25-202ENST00000589219 METTL1Q9UBP6 276 aaKnown RBP8.01□□□□□ -1.13
VPS25-202ENST00000589219 INSIG2Q9Y5U4 225 aa8.01□□□□□ -1.13
VPS25-202ENST00000589219 A0A1W2PPI3 338 aa8□□□□□ -1.13
VPS25-202ENST00000589219 C5orf52A6NGY3 159 aa8□□□□□ -1.13
VPS25-202ENST00000589219 CGB1A6NKQ9 187 aa8□□□□□ -1.13
VPS25-202ENST00000589219 PPP1R2P9O14990 202 aa8□□□□□ -1.13
VPS25-202ENST00000589219 ACTL6BO94805 426 aa8□□□□□ -1.13
VPS25-202ENST00000589219 S100A8P05109 93 aa8□□□□□ -1.13
VPS25-202ENST00000589219 CRYGBP07316 175 aa8□□□□□ -1.13
VPS25-202ENST00000589219 COX7A1P24310 79 aa8□□□□□ -1.13
VPS25-202ENST00000589219 CEACAM3P40198 252 aa8□□□□□ -1.13
VPS25-202ENST00000589219 RPL27AP46776 148 aaKnown RBP8□□□□□ -1.13
VPS25-202ENST00000589219 COMPP49747 757 aaPredicted RBP8□□□□□ -1.13
VPS25-202ENST00000589219 BPIFB3P59826 476 aa8□□□□□ -1.13
VPS25-202ENST00000589219 UBE2G2P60604 165 aa8□□□□□ -1.13
VPS25-202ENST00000589219 SELENOTP62341 195 aa8□□□□□ -1.13
VPS25-202ENST00000589219 GNB1P62873 340 aa8□□□□□ -1.13
VPS25-202ENST00000589219 WT1-ASQ06250 92 aa8□□□□□ -1.13
VPS25-202ENST00000589219 Q5PR19 223 aa8□□□□□ -1.13
VPS25-202ENST00000589219 ZNF343Q6P1L6 599 aa8□□□□□ -1.13
VPS25-202ENST00000589219 C16orf82Q7Z2V1 217 aa8□□□□□ -1.13
VPS25-202ENST00000589219 MOB3BQ86TA1 216 aa8□□□□□ -1.13
VPS25-202ENST00000589219 THAP8Q8NA92 274 aa8□□□□□ -1.13
VPS25-202ENST00000589219 OR10W1Q8NGF6 305 aa8□□□□□ -1.13
VPS25-202ENST00000589219 FAM210BQ96KR6 192 aa8□□□□□ -1.13
VPS25-202ENST00000589219 PFDN5Q99471 154 aa8□□□□□ -1.13
VPS25-202ENST00000589219 TCEAL7Q9BRU2 100 aa8□□□□□ -1.13
VPS25-202ENST00000589219 ONECUT1Q9UBC0 465 aa8□□□□□ -1.13
VPS25-202ENST00000589219 TGIF2-C20orf24A0A0A6YYL0 155 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 C22orf46C9J442 243 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 AP4M1O00189 453 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 ENSAO43768 121 aaKnown RBP7.99□□□□□ -1.13
VPS25-202ENST00000589219 IGHV2-5P01817 119 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 CXCL1P09341 107 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 SRP14P37108 136 aaKnown RBP7.99□□□□□ -1.13
VPS25-202ENST00000589219 AKR1D1P51857 326 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 KIAA0141Q14154 515 aaPredicted RBP7.99□□□□□ -1.13
VPS25-202ENST00000589219 PSG5Q15238 335 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 C10orf55Q5SWW7 151 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 TPTE2P1Q5T6R2 138 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 FAM78BQ5VT40 261 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 LINC00518Q8N0U6 118 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 OR11H6Q8NGC7 330 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 SSX3Q99909 188 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 SSBP3Q9BWW4 388 aaPredicted RBP7.99□□□□□ -1.13
VPS25-202ENST00000589219 SIGLEC9Q9Y336 463 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 LY96Q9Y6Y9 160 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 URGCP-MRPS24S4R325 110 aa7.99□□□□□ -1.13
VPS25-202ENST00000589219 TET2Q6N021 2002 aaPredicted RBP7.98□□□□□ -1.13
VPS25-202ENST00000589219 LOC105371242A0A075B767 164 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 IGKV1OR2-108A0A075B7D4 117 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 TCRBV4S1A1TA0A5B7 111 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 IGLC7A0M8Q6 106 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 OOSP1A8MZH6 123 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 C9JCJ5 164 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 LY6LH3BQJ8 138 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 SOD3P08294 240 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 C8orf88P0DMB2 117 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 GALR1P47211 349 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 TNXAQ16473 311 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 MRGPRG-AS1Q2M3A8 158 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 SPATA31B1PQ5VZV4 182 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 KCNIP4Q6PIL6 250 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 MIR17HGQ75NE6 70 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 LINC01551Q86U37 167 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 KRTAP1-3Q8IUG1 177 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 OR1P1Q8NH06 330 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 PERPQ96FX8 193 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 ACY3Q96HD9 319 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 Q96MF0 132 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 IMMP2LQ96T52 175 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 SMR3AQ99954 134 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 PYGO2Q9BRQ0 406 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 SEPSECSQ9HD40 501 aaKnown RBP7.98□□□□□ -1.13
VPS25-202ENST00000589219 TPSG1Q9NRR2 321 aa7.98□□□□□ -1.13
VPS25-202ENST00000589219 YTHDF2Q9Y5A9 579 aaKnown RBP7.98□□□□□ -1.13
VPS25-202ENST00000589219 ABCA2Q9BZC7 2435 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 IGHV3-72A0A0B4J1Y9 119 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 MDFIC2A0A1B0GVS7 189 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 SCO2A0A1W2PP80 73 aa7.97□□□□□ -1.13
VPS25-202ENST00000589219 PSMB11A5LHX3 300 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms