RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 PRR20BP86481 221 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 PRR20AP86496 221 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 FAM213BQ8TBF2 198 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 TMEM160Q9NX00 188 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 PFDN2Q9UHV9 154 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 ZNF580Q9UK33 172 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 VPREB3Q9UKI3 123 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 TLN2Q9Y4G6 2542 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 NOTCH2Q04721 2471 aa10.99□□□□□ -0.65
UBBP4-202ENST00000584755 IGKV1D-37A0A075B6S9 117 aa10.99□□□□□ -0.65
UBBP4-202ENST00000584755 NUDT19A8MXV4 375 aa10.99□□□□□ -0.65
UBBP4-202ENST00000584755 CYB5BO43169 146 aa10.99□□□□□ -0.65
UBBP4-202ENST00000584755 FFAR4Q5NUL3 377 aa10.99□□□□□ -0.65
UBBP4-202ENST00000584755 COMMD7Q86VX2 200 aa10.99□□□□□ -0.65
UBBP4-202ENST00000584755 EIF4E3Q8N5X7 224 aaKnown RBP10.99□□□□□ -0.65
UBBP4-202ENST00000584755 ACY3Q96HD9 319 aa10.99□□□□□ -0.65
UBBP4-202ENST00000584755 PXMP4Q9Y6I8 212 aa10.99□□□□□ -0.65
UBBP4-202ENST00000584755 TRAV1-1A0A0B4J248 108 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 BTBD17A6NE02 478 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 MFSD2BA6NFX1 497 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 YIF1AO95070 293 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 TSPAN15O95858 294 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 LINC00869P0C866 280 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 HIST1H1BP16401 226 aaKnown RBP10.98□□□□□ -0.65
UBBP4-202ENST00000584755 M6PRP20645 277 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 RND2P52198 227 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 ELLP55199 621 aaPredicted RBP10.98□□□□□ -0.65
UBBP4-202ENST00000584755 RAB2AP61019 212 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 ZNF726P1Q15940 193 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 MIC13Q5XKP0 118 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 UNQ5815/PRO19632Q6UWF5 114 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 SPNS3Q6ZMD2 512 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 RPP25LQ8N5L8 163 aaKnown RBP10.98□□□□□ -0.65
UBBP4-202ENST00000584755 OR4X1Q8NH49 305 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 MBD3L1Q8WWY6 194 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 NPIPB3Q92617 1050 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 TMUB1Q9BVT8 246 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 OTOGQ6ZRI0 2925 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 ACANP16112 2415 aa10.98□□□□□ -0.65
UBBP4-202ENST00000584755 ANK3Q12955 4377 aaKnown RBP10.97□□□□□ -0.65
UBBP4-202ENST00000584755 TRBV9A0A0B4J1U6 114 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 BRI3O95415 125 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 OR10J1P30954 320 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 BLCAPP62952 87 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 ZNF616Q08AN1 781 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 ECSCRQ19T08 205 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 ACOT6Q3I5F7 207 aaPredicted RBP10.97□□□□□ -0.65
UBBP4-202ENST00000584755 SPSB3Q6PJ21 355 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 IL34Q6ZMJ4 242 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 SLC35E3Q7Z769 313 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 TMEM86BQ8N661 226 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 STPG3Q8N7X2 389 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 OR5T1Q8NG75 326 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 MARC2Q969Z3 335 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 RCC1LQ96I51 464 aaKnown RBP10.97□□□□□ -0.65
UBBP4-202ENST00000584755 TRGV9Q99603 122 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 HRH4Q9H3N8 390 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 YAE1D1Q9NRH1 226 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 THYN1Q9P016 225 aa10.97□□□□□ -0.65
UBBP4-202ENST00000584755 TRAV41A0A0B4J266 112 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 TCRBV4S1A1TA0A5B7 111 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 RAB19A4D1S5 217 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 SEC14L6B5MCN3 397 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 G3V318 75 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 HOXA3O43365 443 aaPredicted RBP10.96□□□□□ -0.65
UBBP4-202ENST00000584755 IGHV3-48P01763 117 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 H2AFB1P0C5Y9 115 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 B2MP61769 119 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 CYP2G1PQ6ZSU1 146 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 IL17RELQ6ZVW7 336 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 COMMD1Q8N668 190 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 OR10G4Q8NGN3 311 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 OR10G9Q8NGN4 311 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 OR10G7Q8NGN6 311 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 SLC39A9Q9NUM3 307 aa10.96□□□□□ -0.65
UBBP4-202ENST00000584755 HNF1AP20823 631 aa10.95□□□□□ -0.66
UBBP4-202ENST00000584755 FCGR2BP31994 310 aaPredicted RBP10.95□□□□□ -0.66
UBBP4-202ENST00000584755 SRP14P37108 136 aaKnown RBP10.95□□□□□ -0.66
UBBP4-202ENST00000584755 SELENOTP62341 195 aa10.95□□□□□ -0.66
UBBP4-202ENST00000584755 Q6ZS46 218 aa10.95□□□□□ -0.66
UBBP4-202ENST00000584755 SSX7Q7RTT5 188 aa10.95□□□□□ -0.66
UBBP4-202ENST00000584755 SIGLECL1Q8N7X8 197 aa10.95□□□□□ -0.66
UBBP4-202ENST00000584755 BPIFCQ8NFQ6 507 aa10.95□□□□□ -0.66
UBBP4-202ENST00000584755 IGHV3-21A0A0B4J1V1 117 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 CTXND1A0A1B0GTU2 59 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 ZFP92A6NM28 416 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 TEX46H3BTG2 121 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 AP4M1O00189 453 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 CLN5O75503 358 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 NDUFB8O95169 186 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 HBE1P02100 147 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 IGLC1P0CG04 106 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 PPIFP30405 207 aaKnown RBP10.94□□□□□ -0.66
UBBP4-202ENST00000584755 GCSAMLQ5JQS6 135 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 C9orf152Q5JTZ5 239 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 VN1R17PQ8TDU5 208 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 ACTR3CQ9C0K3 210 aaPredicted RBP10.94□□□□□ -0.66
UBBP4-202ENST00000584755 TNFRSF19Q9NS68 423 aa10.94□□□□□ -0.66
UBBP4-202ENST00000584755 PSMB11A5LHX3 300 aa10.93□□□□□ -0.66
UBBP4-202ENST00000584755 F8W735 103 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms