RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 TMEM218A2RU14 115 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 SOX15O60248 233 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 IFNA4P05014 189 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 RNASE2P10153 161 aaKnown RBP8.57□□□□□ -1.04
TOP3A-216ENST00000583804 SNCAP37840 140 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 BLOC1S1P78537 153 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 CFHR3Q02985 330 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 C19orf54Q5BKX5 351 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 TTC9CQ8N5M4 171 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 UBAC2Q8NBM4 344 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 PINX1Q96BK5 328 aaKnown RBP8.57□□□□□ -1.04
TOP3A-216ENST00000583804 CIB3Q96Q77 187 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-216ENST00000583804 CARHSP1Q9Y2V2 147 aaKnown RBP8.57□□□□□ -1.04
TOP3A-216ENST00000583804 S4R3C0 116 aa8.57□□□□□ -1.04
TOP3A-216ENST00000583804 SMCO3A2RU48 225 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 NPIPB5A8MRT5 1133 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 FBXO24O75426 580 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 IGHG4P01861 327 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 APOC3P02656 99 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 CTRB1P17538 263 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 MFAP2P55001 183 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 BTN1A1Q13410 526 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 PDLIM3Q53GG5 364 aaPredicted RBP8.56□□□□□ -1.04
TOP3A-216ENST00000583804 RPL7L1Q6DKI1 246 aaKnown RBP8.56□□□□□ -1.04
TOP3A-216ENST00000583804 HIST2H2BDQ6DRA6 164 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 CTRB2Q6GPI1 263 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 C12orf54Q6X4T0 127 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 ETV3LQ6ZN32 361 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 LCNL1Q6ZST4 164 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 STX12Q86Y82 276 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 OR4X2Q8NGF9 303 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 FAM110DQ8TAY7 271 aaPredicted RBP8.56□□□□□ -1.04
TOP3A-216ENST00000583804 P2RX4Q99571 388 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 WFDC1Q9HC57 220 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 DNHD1Q96M86 4753 aa8.56□□□□□ -1.04
TOP3A-216ENST00000583804 IGLV1-40P01703 118 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 TRGV3P03979 118 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 CRYGCP07315 174 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 CD28P10747 220 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 KRTAP10-3P60369 221 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 SLC38A11Q08AI6 406 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 FOXE3Q13461 319 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 MLANAQ16655 118 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 KHDC1LQ5JSQ8 128 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 SLC25A24Q6NUK1 477 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 TMEM14EPQ6UXP3 125 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 LILRB2Q8N423 598 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 COMMD1Q8N668 190 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 C3orf56Q8N813 242 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 OR5C1Q8NGR4 320 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 LYPD6BQ8NI32 183 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 WFDC12Q8WWY7 111 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 MDFIQ99750 246 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 SLC25A31Q9H0C2 315 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 KLK15Q9H2R5 256 aa8.55□□□□□ -1.04
TOP3A-216ENST00000583804 BORCS7-ASMTA0A0B4J1R7 106 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 UBE2L5PA0A1B0GUS4 154 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 TCRBV4S1A1TA0A5B7 111 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 ZNF705EA8MWA4 302 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-216ENST00000583804 DNASE2O00115 360 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-216ENST00000583804 CYB5BO43169 146 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 IGHV3-23P01764 117 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 RPLP1P05386 114 aaKnown RBP8.54□□□□□ -1.04
TOP3A-216ENST00000583804 ELANEP08246 267 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 SEC11BP0C7V7 166 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 PSMB8P28062 276 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 SULT1A1P50225 295 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 RAB9AP51151 201 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 SUB1P53999 127 aaKnown RBP eCLIP8.54□□□□□ -1.04
TOP3A-216ENST00000583804 TPPP2P59282 170 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 TAS2R30P59541 319 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 RAB11AP62491 216 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 PXDC1Q5TGL8 231 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 BTNL8Q6UX41 500 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 SVBPQ8N300 66 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 WIPF2Q8TF74 440 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-216ENST00000583804 GINS3Q9BRX5 216 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 NKX6-2Q9C056 277 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-216ENST00000583804 DMRT1Q9Y5R6 373 aa8.54□□□□□ -1.04
TOP3A-216ENST00000583804 F11RQ9Y624 299 aaKnown RBP8.54□□□□□ -1.04
TOP3A-216ENST00000583804 FBN1P35555 2871 aaKnown RBP8.54□□□□□ -1.04
TOP3A-216ENST00000583804 INS-IGF2F8WCM5 200 aa8.53□□□□□ -1.04
TOP3A-216ENST00000583804 H3BUA1 57 aa8.53□□□□□ -1.04
TOP3A-216ENST00000583804 OR2J3O76001 311 aa8.53□□□□□ -1.04
TOP3A-216ENST00000583804 OPRK1P41145 380 aa8.53□□□□□ -1.04
TOP3A-216ENST00000583804 RPP30P78346 268 aaKnown RBP8.53□□□□□ -1.04
TOP3A-216ENST00000583804 RHOGP84095 191 aa8.53□□□□□ -1.04
TOP3A-216ENST00000583804 TCTEX1D4Q5JR98 221 aa8.53□□□□□ -1.04
TOP3A-216ENST00000583804 ATRAIDQ6UW56 229 aa8.53□□□□□ -1.04
TOP3A-216ENST00000583804 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.53□□□□□ -1.04
TOP3A-216ENST00000583804 CITED2Q99967 270 aaPredicted RBP8.53□□□□□ -1.04
TOP3A-216ENST00000583804 SEC11CQ9BY50 192 aa8.53□□□□□ -1.04
TOP3A-216ENST00000583804 FBXL7Q9UJT9 491 aa8.53□□□□□ -1.04
TOP3A-216ENST00000583804 RFNGQ9Y644 331 aa8.53□□□□□ -1.04
TOP3A-216ENST00000583804 PMS2P5A8MQ11 134 aa8.52□□□□□ -1.05
TOP3A-216ENST00000583804 HIST1H1BP16401 226 aaKnown RBP8.52□□□□□ -1.05
TOP3A-216ENST00000583804 ADCYAP1P18509 176 aa8.52□□□□□ -1.05
TOP3A-216ENST00000583804 RAB5CP51148 216 aa8.52□□□□□ -1.05
TOP3A-216ENST00000583804 OR10P1Q8NGE3 313 aa8.52□□□□□ -1.05
TOP3A-216ENST00000583804 OR1L6Q8NGR2 347 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms