RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 SH2D7A6NKC9 451 aaPredicted RBP10.63□□□□□ -0.71
CSNK1D-220ENST00000581737 INS-IGF2F8WCM5 200 aa10.63□□□□□ -0.71
CSNK1D-220ENST00000581737 IGLV2-23P01705 113 aa10.63□□□□□ -0.71
CSNK1D-220ENST00000581737 ZP3P21754 424 aa10.63□□□□□ -0.71
CSNK1D-220ENST00000581737 PROK1P58294 105 aa10.63□□□□□ -0.71
CSNK1D-220ENST00000581737 PJVKQ0ZLH3 352 aa10.63□□□□□ -0.71
CSNK1D-220ENST00000581737 PPP1R27Q86WC6 154 aa10.63□□□□□ -0.71
CSNK1D-220ENST00000581737 FAM213BQ8TBF2 198 aa10.63□□□□□ -0.71
CSNK1D-220ENST00000581737 RBMXL1Q96E39 390 aaKnown RBP10.63□□□□□ -0.71
CSNK1D-220ENST00000581737 SERTAD4Q9NUC0 356 aa10.63□□□□□ -0.71
CSNK1D-220ENST00000581737 ZNF580Q9UK33 172 aa10.63□□□□□ -0.71
CSNK1D-220ENST00000581737 C15orf62A8K5M9 175 aa10.62□□□□□ -0.71
CSNK1D-220ENST00000581737 FGF7P21781 194 aa10.62□□□□□ -0.71
CSNK1D-220ENST00000581737 VWC2Q2TAL6 325 aa10.62□□□□□ -0.71
CSNK1D-220ENST00000581737 Q6ZS46 218 aa10.62□□□□□ -0.71
CSNK1D-220ENST00000581737 KLHDC1Q8N7A1 406 aa10.62□□□□□ -0.71
CSNK1D-220ENST00000581737 WFDC12Q8WWY7 111 aa10.62□□□□□ -0.71
CSNK1D-220ENST00000581737 SRSF8Q9BRL6 282 aaKnown RBP10.62□□□□□ -0.71
CSNK1D-220ENST00000581737 HRH4Q9H3N8 390 aa10.62□□□□□ -0.71
CSNK1D-220ENST00000581737 PLXNB1O43157 2135 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 TNCP24821 2201 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 IGHV7-81A0A0B4J1V7 117 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 TRAV3A0A0B4J244 114 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 SMCO3A2RU48 225 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 SRRM4A7MD48 611 aaKnown RBP10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 CA2P00918 260 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 CRYGBP07316 175 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 SLC35B1P78383 322 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 TMEM95Q3KNT9 176 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 C2orf83Q53S99 150 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 SPINK9Q5DT21 86 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 TOR2AQ5JU69 321 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 ZNF562Q6V9R5 426 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 ABHD5Q8WTS1 349 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 HSPB9Q9BQS6 159 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 WNT10AQ9GZT5 417 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 SH3BGRL3Q9H299 93 aa10.61□□□□□ -0.71
CSNK1D-220ENST00000581737 TEX50A0A1B0GTY4 177 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 CORTO00230 105 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 CYB5BO43169 146 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 CNIH1O95406 144 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 IFNA1P01562 189 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 IGF1P05019 195 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 H2AFB1P0C5Y9 115 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 RPL27AP46776 148 aaKnown RBP10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 KRTAP10-3P60369 221 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 CX3CL1P78423 397 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 PRSS8Q16651 343 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 TMEM41BQ5BJD5 291 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 ETFRF1Q6IPR1 90 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 CENPVQ7Z7K6 275 aaPredicted RBP10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 HAPLN4Q86UW8 402 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 ARPC1AQ92747 370 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 NARS2Q96I59 477 aaKnown RBP10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 SLC35E1Q96K37 410 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 SMDT1Q9H4I9 107 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 NPVFQ9HCQ7 196 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 TPSG1Q9NRR2 321 aa10.6□□□□□ -0.71
CSNK1D-220ENST00000581737 PSMB11A5LHX3 300 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 PMS2P5A8MQ11 134 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 FCN1O00602 326 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 GNB1P62873 340 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 AKR1C1Q04828 323 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 FXYD3Q14802 87 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 PEA15Q15121 130 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 ACOT6Q3I5F7 207 aaPredicted RBP10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 BTNL8Q6UX41 500 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 C1QL4Q86Z23 238 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 CCDC28AQ8IWP9 274 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 RNASEH2CQ8TDP1 164 aaKnown RBP10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 ZNF430Q9H8G1 570 aaPredicted RBP10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 TREM1Q9NP99 234 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 NDUFA4L2Q9NRX3 87 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 WDR83OSQ9Y284 106 aa10.59□□□□□ -0.71
CSNK1D-220ENST00000581737 ATP6V0E1O15342 81 aa10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 TAGLN2P37802 199 aaKnown RBP10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 CRIP2P52943 208 aaPredicted RBP10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 NDPQ00604 133 aa10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 RUNX1Q01196 453 aa10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 ARL16Q0P5N6 197 aa10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 TNXAQ16473 311 aa10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 OR4X2Q8NGF9 303 aa10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 OR1L6Q8NGR2 347 aa10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 LYPD6BQ8NI32 183 aa10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 CACNG8Q8WXS5 425 aa10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 NOL4LQ96MY1 436 aaPredicted RBP10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 NPCDR1Q9BY65 106 aa10.58□□□□□ -0.72
CSNK1D-220ENST00000581737 DNAH3Q8TD57 4116 aa10.57□□□□□ -0.72
CSNK1D-220ENST00000581737 TRAV1-1A0A0B4J248 108 aa10.57□□□□□ -0.72
CSNK1D-220ENST00000581737 TRAV41A0A0B4J266 112 aa10.57□□□□□ -0.72
CSNK1D-220ENST00000581737 GPX4P36969 197 aaPredicted RBP10.57□□□□□ -0.72
CSNK1D-220ENST00000581737 PPT1P50897 306 aa10.57□□□□□ -0.72
CSNK1D-220ENST00000581737 TEPPQ6URK8 271 aa10.57□□□□□ -0.72
CSNK1D-220ENST00000581737 OR5AU1Q8NGC0 362 aa10.57□□□□□ -0.72
CSNK1D-220ENST00000581737 TMEM68Q96MH6 324 aa10.57□□□□□ -0.72
CSNK1D-220ENST00000581737 ACTR3CQ9C0K3 210 aaPredicted RBP10.57□□□□□ -0.72
CSNK1D-220ENST00000581737 A0A1B0GW64 132 aa10.56□□□□□ -0.72
CSNK1D-220ENST00000581737 LINC01548A6NM66 108 aa10.56□□□□□ -0.72
CSNK1D-220ENST00000581737 MT-CO2P00403 227 aa10.56□□□□□ -0.72
CSNK1D-220ENST00000581737 OPRK1P41145 380 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms