RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 TEX15Q9BXT5 2789 aa9.34□□□□□ -0.91
CDRT1-206ENST00000571263 SMCO3A2RU48 225 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 OR2J3O76001 311 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 CFDP00746 253 aaPredicted RBP9.33□□□□□ -0.92
CDRT1-206ENST00000571263 TRGV3P03979 118 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 SEC11BP0C7V7 166 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 MDKP21741 143 aaPredicted RBP9.33□□□□□ -0.92
CDRT1-206ENST00000571263 SELENOTP62341 195 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 RHOGP84095 191 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 SERF2P84101 59 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 FOXE3Q13461 319 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 GAMTQ14353 236 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 RPL7L1Q6DKI1 246 aaKnown RBP9.33□□□□□ -0.92
CDRT1-206ENST00000571263 ACSM6Q6P461 480 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 TREML4Q6UXN2 200 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 SCARB1Q8WTV0 552 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 WFDC12Q8WWY7 111 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 TAF15Q92804 592 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDRT1-206ENST00000571263 EEF1AKMT3Q96AZ1 226 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 BSCL2Q96G97 398 aaPredicted RBP9.33□□□□□ -0.92
CDRT1-206ENST00000571263 NOL4LQ96MY1 436 aaPredicted RBP9.33□□□□□ -0.92
CDRT1-206ENST00000571263 GINS3Q9BRX5 216 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 PSMG3Q9BT73 122 aaPredicted RBP9.33□□□□□ -0.92
CDRT1-206ENST00000571263 WDR61Q9GZS3 305 aaKnown RBP9.33□□□□□ -0.92
CDRT1-206ENST00000571263 C21orf62Q9NYP8 219 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 HIVEP2P31629 2446 aa9.33□□□□□ -0.92
CDRT1-206ENST00000571263 UBE2L5PA0A1B0GUS4 154 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 K7EIM0 57 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 CLN5O75503 358 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 IFNA7P01567 189 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 PF4V1P10720 104 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 RAB9AP51151 201 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 BTNL8Q6UX41 500 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 RNF152Q8N8N0 203 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 ST8SIA2Q92186 375 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 FNDC4Q9H6D8 234 aaPredicted RBP9.32□□□□□ -0.92
CDRT1-206ENST00000571263 WFDC1Q9HC57 220 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 SERTAD4Q9NUC0 356 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 LINC00527Q9UJ94 153 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 BOLA1Q9Y3E2 137 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 LSM4Q9Y4Z0 139 aaKnown RBP9.32□□□□□ -0.92
CDRT1-206ENST00000571263 DMRT1Q9Y5R6 373 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 TNCP24821 2201 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 OTOGQ6ZRI0 2925 aa9.32□□□□□ -0.92
CDRT1-206ENST00000571263 GNG7O60262 68 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 NDUFB8O95169 186 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 MBP02144 154 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 PRH1P02810 166 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 FGF7P21781 194 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 PSMB8P28062 276 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 TPPP2P59282 170 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 C15orf32Q32M92 178 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 THAP8Q8NA92 274 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 OR4X2Q8NGF9 303 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 LRRC20Q8TCA0 184 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 NPIPB3Q92617 1050 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 ACY3Q96HD9 319 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 MS4A10Q96PG2 267 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 TRGV9Q99603 122 aa9.31□□□□□ -0.92
CDRT1-206ENST00000571263 ZFP92A6NM28 416 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 UMAD1C9J7I0 102 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 SPP1P10451 314 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 ATP6V0CP27449 155 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 S100A7P31151 101 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 RPL29P47914 159 aaKnown RBP9.3□□□□□ -0.92
CDRT1-206ENST00000571263 CAMLGP49069 296 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 RAB5CP51148 216 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 RND2P52198 227 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 MLANAQ16655 118 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 PXDC1Q5TGL8 231 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 SPSB3Q6PJ21 355 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 TEX261Q6UWH6 196 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 ZNF767PQ75MW2 155 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 KLHDC1Q8N7A1 406 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 OR2G3Q8NGZ4 309 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 LINC01006Q8NI28 216 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 C19orf24Q9BVV8 132 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 NPCDR1Q9BY65 106 aa9.3□□□□□ -0.92
CDRT1-206ENST00000571263 ZNF469Q96JG9 3925 aaPredicted RBP9.3□□□□□ -0.92
CDRT1-206ENST00000571263 TCRBV4S1A1TA0A5B7 111 aa9.29□□□□□ -0.92
CDRT1-206ENST00000571263 CLPSL1A2RUU4 121 aa9.29□□□□□ -0.92
CDRT1-206ENST00000571263 AGPAT2O15120 278 aa9.29□□□□□ -0.92
CDRT1-206ENST00000571263 NUPL2O15504 423 aaKnown RBP9.29□□□□□ -0.92
CDRT1-206ENST00000571263 YPEL3P61236 119 aaPredicted RBP9.29□□□□□ -0.92
CDRT1-206ENST00000571263 FOXL1Q12952 345 aa9.29□□□□□ -0.92
CDRT1-206ENST00000571263 Q56UQ5 140 aa9.29□□□□□ -0.92
CDRT1-206ENST00000571263 Q6ZRG5 221 aa9.29□□□□□ -0.92
CDRT1-206ENST00000571263 S100A7AQ86SG5 101 aa9.29□□□□□ -0.92
CDRT1-206ENST00000571263 ZNF329Q86UD4 541 aa9.29□□□□□ -0.92
CDRT1-206ENST00000571263 HSD17B11Q8NBQ5 300 aa9.29□□□□□ -0.92
CDRT1-206ENST00000571263 OR5AU1Q8NGC0 362 aa9.29□□□□□ -0.92
CDRT1-206ENST00000571263 ZNF502Q8TBZ5 544 aa9.29□□□□□ -0.92
CDRT1-206ENST00000571263 UBE2E2Q96LR5 201 aa9.29□□□□□ -0.92
CDRT1-206ENST00000571263 MAP1AP78559 2803 aaPredicted RBP9.28□□□□□ -0.92
CDRT1-206ENST00000571263 AKAP9Q99996 3911 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 TSPAN15O95858 294 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 OR10J1P30954 320 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 TMEM95Q3KNT9 176 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 DPPA3Q6W0C5 159 aa9.28□□□□□ -0.92
CDRT1-206ENST00000571263 C19orf35Q6ZS72 473 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms