RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 NECAP1Q8NC96 275 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 OR4F5Q8NH21 305 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 CACNG8Q8WXS5 425 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 ACY3Q96HD9 319 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 KLK9Q9UKQ9 250 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 JMJD1CQ15652 2540 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 TRBV9A0A0B4J1U6 114 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 TMEM89A2RUT3 159 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 MFSD2BA6NFX1 497 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 FAM223BA6NKX1 122 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 RND2P52198 227 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 ZNF266Q14584 549 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 MLANAQ16655 118 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 ACSM6Q6P461 480 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 FAM223AQ8IWN6 122 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 KLHDC1Q8N7A1 406 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 LINC01006Q8NI28 216 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 SLA2Q9H6Q3 261 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 CYTL1Q9NRR1 136 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 S4R3C0 116 aa12.03□□□□□ -0.48
HERPUD1-219ENST00000570273 FNDC10F2Z333 226 aa12.02□□□□□ -0.49
HERPUD1-219ENST00000570273 BRI3O95415 125 aa12.02□□□□□ -0.49
HERPUD1-219ENST00000570273 FOXE3Q13461 319 aa12.02□□□□□ -0.49
HERPUD1-219ENST00000570273 GAMTQ14353 236 aa12.02□□□□□ -0.49
HERPUD1-219ENST00000570273 VWC2Q2TAL6 325 aa12.02□□□□□ -0.49
HERPUD1-219ENST00000570273 C15orf32Q32M92 178 aa12.02□□□□□ -0.49
HERPUD1-219ENST00000570273 TEX38Q6PEX7 206 aa12.02□□□□□ -0.49
HERPUD1-219ENST00000570273 LCNL1Q6ZST4 164 aa12.02□□□□□ -0.49
HERPUD1-219ENST00000570273 KLK15Q9H2R5 256 aa12.02□□□□□ -0.49
HERPUD1-219ENST00000570273 IGHV3-23P01764 117 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 ELANEP08246 267 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 FGF7P21781 194 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 PSMB8P28062 276 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 ATP5G2Q06055 141 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 SLC51BQ86UW2 128 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 PRIMA1Q86XR5 153 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 SCGB1C1Q8TD33 95 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 VN1R17PQ8TDU5 208 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 SCARB1Q8WTV0 552 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 NPIPB3Q92617 1050 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 EEF1AKMT3Q96AZ1 226 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 C21orf62Q9NYP8 219 aa12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
HERPUD1-219ENST00000570273 JTBO76095 146 aa12□□□□□ -0.49
HERPUD1-219ENST00000570273 RAB9AP51151 201 aa12□□□□□ -0.49
HERPUD1-219ENST00000570273 MFAP4P55083 255 aa12□□□□□ -0.49
HERPUD1-219ENST00000570273 EIF5AP63241 154 aaKnown RBP12□□□□□ -0.49
HERPUD1-219ENST00000570273 Q56UQ5 140 aa12□□□□□ -0.49
HERPUD1-219ENST00000570273 BTNL8Q6UX41 500 aa12□□□□□ -0.49
HERPUD1-219ENST00000570273 TREML4Q6UXN2 200 aa12□□□□□ -0.49
HERPUD1-219ENST00000570273 COMMD1Q8N668 190 aa12□□□□□ -0.49
HERPUD1-219ENST00000570273 UBAC2Q8NBM4 344 aa12□□□□□ -0.49
HERPUD1-219ENST00000570273 USMG5Q96IX5 58 aa12□□□□□ -0.49
HERPUD1-219ENST00000570273 CXorf58Q96LI9 332 aa12□□□□□ -0.49
HERPUD1-219ENST00000570273 WDR61Q9GZS3 305 aaKnown RBP12□□□□□ -0.49
HERPUD1-219ENST00000570273 NPVFQ9HCQ7 196 aa12□□□□□ -0.49
HERPUD1-219ENST00000570273 WDR83OSQ9Y284 106 aa12□□□□□ -0.49
HERPUD1-219ENST00000570273 CLPSL1A2RUU4 121 aa11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 TPT1P13693 172 aaKnown RBP11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 MDKP21741 143 aaPredicted RBP11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 NPBWR1P48145 328 aa11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 TMEM144Q7Z5S9 345 aa11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 HSD17B11Q8NBQ5 300 aa11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 TMEM116Q8NCL8 245 aa11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 OR5AU1Q8NGC0 362 aa11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 OR4X2Q8NGF9 303 aa11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 OR4X1Q8NH49 305 aa11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 ZNF502Q8TBZ5 544 aa11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 RNF114Q9Y508 228 aa11.99□□□□□ -0.49
HERPUD1-219ENST00000570273 A0A0G2JLM5 398 aa11.98□□□□□ -0.49
HERPUD1-219ENST00000570273 RPLP1P05386 114 aaKnown RBP11.98□□□□□ -0.49
HERPUD1-219ENST00000570273 KRTAP21-3Q3LHN1 58 aa11.98□□□□□ -0.49
HERPUD1-219ENST00000570273 TEPPQ6URK8 271 aa11.98□□□□□ -0.49
HERPUD1-219ENST00000570273 STOML3Q8TAV4 291 aa11.98□□□□□ -0.49
HERPUD1-219ENST00000570273 ST8SIA2Q92186 375 aa11.98□□□□□ -0.49
HERPUD1-219ENST00000570273 PARD6GQ9BYG4 376 aaPredicted RBP11.98□□□□□ -0.49
HERPUD1-219ENST00000570273 FBN1P35555 2871 aaKnown RBP11.98□□□□□ -0.49
HERPUD1-219ENST00000570273 TRBV7-1A0A0A6YYK4 115 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 ZFP92A6NM28 416 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 HAX1O00165 279 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 GNG7O60262 68 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 CLN5O75503 358 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 IGHV3-11P01762 117 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 OR10J1P30954 320 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 RUNX1Q01196 453 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 RAB31Q13636 194 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 RNF152Q8N8N0 203 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 THAP8Q8NA92 274 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 CCDC140Q96MF4 163 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 MGST2Q99735 147 aa11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 LSM4Q9Y4Z0 139 aaKnown RBP11.97□□□□□ -0.49
HERPUD1-219ENST00000570273 MPDU1O75352 247 aa11.96□□□□□ -0.49
HERPUD1-219ENST00000570273 SCGB2A1O75556 95 aa11.96□□□□□ -0.49
HERPUD1-219ENST00000570273 ATP6V0CP27449 155 aa11.96□□□□□ -0.49
HERPUD1-219ENST00000570273 GPR183P32249 361 aa11.96□□□□□ -0.49
HERPUD1-219ENST00000570273 CAMLGP49069 296 aa11.96□□□□□ -0.49
HERPUD1-219ENST00000570273 KHDC1LQ5JSQ8 128 aa11.96□□□□□ -0.49
HERPUD1-219ENST00000570273 CLEC19AQ6UXS0 136 aa11.96□□□□□ -0.49
HERPUD1-219ENST00000570273 BAP18Q8IXM2 172 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms