RNA–Protein interactions for RNA: ENST00000568936.1

CCNDBP1-214, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-214ENST00000568936 ACTR3CQ9C0K3 210 aaPredicted RBP9.22□□□□□ -0.93
CCNDBP1-214ENST00000568936 VAX2Q9UIW0 290 aa9.22□□□□□ -0.93
CCNDBP1-214ENST00000568936 CSPG4Q6UVK1 2322 aa9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 NCBP2LA6PVI3 153 aaKnown RBP9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 MT-ND4LP03901 98 aa9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 CRYBA1P05813 215 aa9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 MAS1LP35410 378 aa9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 CEBPGP53567 150 aa9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 DLK1P80370 383 aa9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 ACOT6Q3I5F7 207 aaPredicted RBP9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 RNF212Q495C1 297 aa9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 RBMS3Q6XE24 437 aaKnown RBP9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 SLC35E3Q7Z769 313 aa9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 BCL6BQ8N143 479 aaPredicted RBP9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 HIST1H2BAQ96A08 127 aa9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 TVP23CQ96ET8 276 aa9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 FAM103A1Q9BTL3 118 aaKnown RBP9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 MEGF9Q9H1U4 602 aa9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 DMRT1Q9Y5R6 373 aa9.21□□□□□ -0.93
CCNDBP1-214ENST00000568936 MDFIC2A0A1B0GVS7 189 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 NDUFS6O75380 124 aaKnown RBP9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 FBP1P09467 338 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 GATA3P23771 443 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 TREML4Q6UXN2 200 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 FNDC4Q9H6D8 234 aaPredicted RBP9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 SLC25A22Q9H936 323 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 CCDC168Q8NDH2 2452 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 A0A087WWC5 75 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 A0A1W2PN81 502 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 SH2D7A6NKC9 451 aaPredicted RBP9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 CYB5BO43169 146 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 ACTL6BO94805 426 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 FAM106CPP0CH98 169 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 BRS3P32247 399 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 CHRNA7P36544 502 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 ERHP84090 104 aaKnown RBP9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 FAM90A2PQ658T7 463 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 TMEM219Q86XT9 240 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 SSMEM1Q8WWF3 244 aa9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 MRPL36Q9P0J6 103 aaKnown RBP9.2□□□□□ -0.94
CCNDBP1-214ENST00000568936 IGHV3-48P01763 117 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 CX3CL1P78423 397 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 PNRC1Q12796 327 aaPredicted RBP9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 FXYD3Q14802 87 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 ASPHD1Q5U4P2 390 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 C22orf15Q8WYQ4 148 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 HSPB9Q9BQS6 159 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 MANBALQ9NQG1 85 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 MXRA5Q9NR99 2828 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 IGKV1OR2-108A0A075B7D4 117 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 SMCO3A2RU48 225 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 B4DEV8 164 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 SEC14L6B5MCN3 397 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 EIF3GO75821 320 aaKnown RBP eCLIP9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 FSHBP01225 129 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 EGR2P11161 476 aaPredicted RBP9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 OPRK1P41145 380 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 PVRIGQ6DKI7 326 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 ISOC2Q96AB3 205 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 MGST2Q99735 147 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 SSX3Q99909 188 aa9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 LSM4Q9Y4Z0 139 aaKnown RBP9.19□□□□□ -0.94
CCNDBP1-214ENST00000568936 IGHV7-81A0A0B4J1V7 117 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 LINC01548A6NM66 108 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 J3QLI3 93 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 OR2C1O95371 312 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 CNIH1O95406 144 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 AMY1AP04745 511 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 CDC34P49427 236 aaPredicted RBP9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 PSMB3P49720 205 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 ATP5IP56385 69 aaPredicted RBP9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 RAB5BP61020 215 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 MEF2BQ02080 365 aaPredicted RBP9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 CD69Q07108 199 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 GAMTQ14353 236 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 ZNF562Q6V9R5 426 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 OR2T6Q8NHC8 308 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 RAB24Q969Q5 203 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 KCNIP2Q9NS61 270 aa9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 FLNAP21333 2647 aaKnown RBP9.18□□□□□ -0.94
CCNDBP1-214ENST00000568936 FNDC10F2Z333 226 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 SMAD7O15105 426 aaKnown RBP9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 DEFA4P12838 97 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 ZNF114Q8NC26 417 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 NPVFQ9HCQ7 196 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 BIN3Q9NQY0 253 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 CREBBPQ92793 2442 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 CXorf65A6NEN9 183 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 C1orf196B1AJZ1 125 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 TMEM250H0YL14 139 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 HMGB3O15347 200 aaKnown RBP9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 LY6EQ16553 131 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 DEFB112Q30KQ8 113 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 YPEL4Q96NS1 127 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 FOXC2Q99958 501 aa9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 F11RQ9Y624 299 aaKnown RBP9.17□□□□□ -0.94
CCNDBP1-214ENST00000568936 IGHV3-21A0A0B4J1V1 117 aa9.16□□□□□ -0.94
CCNDBP1-214ENST00000568936 H3BUX3 64 aa9.16□□□□□ -0.94
CCNDBP1-214ENST00000568936 TSPAN9O75954 239 aa9.16□□□□□ -0.94
CCNDBP1-214ENST00000568936 HLA-DRB1P01911 266 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms