RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 XCL2Q9UBD3 114 aa8.43□□□□□ -1.06
GTF3C1-209ENST00000568569 BLOC1S6Q9UL45 172 aa8.43□□□□□ -1.06
GTF3C1-209ENST00000568569 MEIS3P1A6NDR6 274 aa8.42□□□□□ -1.06
GTF3C1-209ENST00000568569 HELTA6NFD8 242 aa8.42□□□□□ -1.06
GTF3C1-209ENST00000568569 GPR31O00270 319 aa8.42□□□□□ -1.06
GTF3C1-209ENST00000568569 SCGB2A1O75556 95 aa8.42□□□□□ -1.06
GTF3C1-209ENST00000568569 RFX2P48378 723 aa8.42□□□□□ -1.06
GTF3C1-209ENST00000568569 HSPE1P61604 102 aaKnown RBP8.42□□□□□ -1.06
GTF3C1-209ENST00000568569 PSMG4Q5JS54 123 aa8.42□□□□□ -1.06
GTF3C1-209ENST00000568569 H2BFWTQ7Z2G1 175 aa8.42□□□□□ -1.06
GTF3C1-209ENST00000568569 OR5H6Q8NGV6 325 aa8.42□□□□□ -1.06
GTF3C1-209ENST00000568569 SEC22AQ96IW7 307 aa8.42□□□□□ -1.06
GTF3C1-209ENST00000568569 DIABLOQ9NR28 239 aa8.42□□□□□ -1.06
GTF3C1-209ENST00000568569 FAM212BQ9NTI7 297 aaPredicted RBP8.42□□□□□ -1.06
GTF3C1-209ENST00000568569 TEX48A0A1B0GUV7 120 aa8.41□□□□□ -1.06
GTF3C1-209ENST00000568569 CORTO00230 105 aa8.41□□□□□ -1.06
GTF3C1-209ENST00000568569 S100GP29377 79 aa8.41□□□□□ -1.06
GTF3C1-209ENST00000568569 SNCAP37840 140 aa8.41□□□□□ -1.06
GTF3C1-209ENST00000568569 EMP1P54849 157 aa8.41□□□□□ -1.06
GTF3C1-209ENST00000568569 DHRS2Q13268 280 aa8.41□□□□□ -1.06
GTF3C1-209ENST00000568569 PHLDA2Q53GA4 152 aa8.41□□□□□ -1.06
GTF3C1-209ENST00000568569 ZNF705AQ6ZN79 300 aaPredicted RBP8.41□□□□□ -1.06
GTF3C1-209ENST00000568569 NEU1Q99519 415 aa8.41□□□□□ -1.06
GTF3C1-209ENST00000568569 FXYD6Q9H0Q3 95 aa8.41□□□□□ -1.06
GTF3C1-209ENST00000568569 ZNF705FA8MVS1 300 aaPredicted RBP8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 CLN5O75503 358 aa8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 ZNF705DP0CH99 300 aaPredicted RBP8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 ZNF705BP0CI00 300 aaPredicted RBP8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 PPP5CP53041 499 aa8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 AP2S1P53680 142 aaPredicted RBP8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 TAS2R46P59540 309 aa8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 SNRPD3P62318 126 aaKnown RBP8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 TNP2Q05952 138 aa8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 SPINK9Q5DT21 86 aa8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 Q8N1X5 172 aa8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 OR5H2Q8NGV7 314 aa8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 TMEM230Q96A57 120 aa8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 MRGPRFQ96AM1 343 aa8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 NIPSNAP3BQ9BS92 247 aa8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 RNF167Q9H6Y7 350 aa8.4□□□□□ -1.06
GTF3C1-209ENST00000568569 SMIM9A6NGZ8 99 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 INS-IGF2F8WCM5 200 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 H3BMM0 161 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 IGKV1-39P01597 117 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 PMP2P02689 132 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 IGKV1D-39P04432 117 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 SDC2P34741 201 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 OPRK1P41145 380 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 SUB1P53999 127 aaKnown RBP eCLIP8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 FAM3BP58499 235 aaPredicted RBP8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 MXD1Q05195 221 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 IDNKQ5T6J7 187 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 SLC35G3Q8N808 338 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 OR6F1Q8NGZ6 308 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 OR4X1Q8NH49 305 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 GLMPQ8WWB7 406 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 SEPSECSQ9HD40 501 aaKnown RBP8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 DKK2Q9UBU2 259 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 ANAPC10Q9UM13 185 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 SSR3Q9UNL2 185 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 RFNGQ9Y644 331 aa8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 APOBP04114 4563 aaKnown RBP8.39□□□□□ -1.07
GTF3C1-209ENST00000568569 FAM90A26D6RGX4 464 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 IGKV1-17P01599 117 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 HLA-DRB4P13762 266 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 HTN3P15516 51 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 PSMB9P28065 219 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 FAM222AQ5U5X8 452 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 LPCAT3Q6P1A2 487 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 C16orf54Q6UWD8 224 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 TBC1D26Q86UD7 250 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 MRPL36Q9P0J6 103 aaKnown RBP8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 TMED3Q9Y3Q3 217 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 U3KQE9 123 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 HLA-DRB4X5D2U9 266 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 DNAH5Q8TE73 4624 aa8.38□□□□□ -1.07
GTF3C1-209ENST00000568569 IGHV3OR16-12A0A075B7B8 117 aa8.37□□□□□ -1.07
GTF3C1-209ENST00000568569 TRAV30A0A087WSZ9 112 aa8.37□□□□□ -1.07
GTF3C1-209ENST00000568569 HNRNPCP07910 306 aaKnown RBP eCLIP8.37□□□□□ -1.07
GTF3C1-209ENST00000568569 RNASE2P10153 161 aaKnown RBP8.37□□□□□ -1.07
GTF3C1-209ENST00000568569 OXA1LQ15070 435 aa8.37□□□□□ -1.07
GTF3C1-209ENST00000568569 TMEM88Q6PEY1 159 aa8.37□□□□□ -1.07
GTF3C1-209ENST00000568569 NRG4Q8WWG1 115 aa8.37□□□□□ -1.07
GTF3C1-209ENST00000568569 PDCD10Q9BUL8 212 aa8.37□□□□□ -1.07
GTF3C1-209ENST00000568569 FNDC4Q9H6D8 234 aaPredicted RBP8.37□□□□□ -1.07
GTF3C1-209ENST00000568569 NRN1Q9NPD7 142 aa8.37□□□□□ -1.07
GTF3C1-209ENST00000568569 SCRT2Q9NQ03 307 aa8.37□□□□□ -1.07
GTF3C1-209ENST00000568569 CLEC2LP0C7M8 214 aa8.36□□□□□ -1.07
GTF3C1-209ENST00000568569 NAT1P18440 290 aa8.36□□□□□ -1.07
GTF3C1-209ENST00000568569 HRH1P35367 487 aa8.36□□□□□ -1.07
GTF3C1-209ENST00000568569 NKX2-1P43699 371 aaPredicted RBP8.36□□□□□ -1.07
GTF3C1-209ENST00000568569 RPL5P46777 297 aaKnown RBP8.36□□□□□ -1.07
GTF3C1-209ENST00000568569 HOXA1P49639 335 aaPredicted RBP8.36□□□□□ -1.07
GTF3C1-209ENST00000568569 IZUMO4Q1ZYL8 232 aa8.36□□□□□ -1.07
GTF3C1-209ENST00000568569 TIGITQ495A1 244 aa8.36□□□□□ -1.07
GTF3C1-209ENST00000568569 C6orf223Q8N319 242 aa8.36□□□□□ -1.07
GTF3C1-209ENST00000568569 C15orf53Q8NAA6 179 aa8.36□□□□□ -1.07
GTF3C1-209ENST00000568569 CNBD2Q96M20 576 aa8.36□□□□□ -1.07
GTF3C1-209ENST00000568569 ATG101Q9BSB4 218 aa8.36□□□□□ -1.07
GTF3C1-209ENST00000568569 A0A0B4J293 547 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms