RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 METTL1Q9UBP6 276 aaKnown RBP4.54□□□□□ -1.68
SF3B3-210ENST00000567654 SIGLEC9Q9Y336 463 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 TIMM9Q9Y5J7 89 aa4.54□□□□□ -1.68
SF3B3-210ENST00000567654 PDZD2O15018 2839 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 ZANQ9Y493 2812 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 CUBNO60494 3623 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 IGKV1OR2-108A0A075B7D4 117 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 TRAV40A0A0B4J280 105 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 SMCO3A2RU48 225 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 RAB19A4D1S5 217 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 INS-IGF2F8WCM5 200 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 TRIM77I1YAP6 450 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 NDUFS8O00217 210 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 HMGB3O15347 200 aaKnown RBP4.53□□□□□ -1.68
SF3B3-210ENST00000567654 YIF1AO95070 293 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 NDUFA3O95167 84 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 IGHV3-48P01763 117 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 IFNA4P05014 189 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 IGHV4-38-2P0DP08 117 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 CD1BP29016 333 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 SAA4P35542 130 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 SNCAP37840 140 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 RPL27AP46776 148 aaKnown RBP4.53□□□□□ -1.68
SF3B3-210ENST00000567654 LGALS7P47929 136 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 COMPP49747 757 aaPredicted RBP4.53□□□□□ -1.68
SF3B3-210ENST00000567654 UBE2E1P51965 193 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 FGF8P55075 233 aaPredicted RBP4.53□□□□□ -1.68
SF3B3-210ENST00000567654 GNB1P62873 340 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 DLK1P80370 383 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 NDPQ00604 133 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 ATP6V1FQ16864 119 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 CLEC12BQ2HXU8 276 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 VMA21Q3ZAQ7 101 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 C2orf83Q53S99 150 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 AKR1C8PQ5T2L2 129 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 ATRAIDQ6UW56 229 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 BRD3OSQ6XYD6 125 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 IL34Q6ZMJ4 242 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 PPP1R27Q86WC6 154 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 OR5B3Q8NH48 314 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 PINX1Q96BK5 328 aaKnown RBP4.53□□□□□ -1.68
SF3B3-210ENST00000567654 FAM210AQ96ND0 272 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 P2RX4Q99571 388 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 FAM103A1Q9BTL3 118 aaKnown RBP4.53□□□□□ -1.68
SF3B3-210ENST00000567654 GGTLC1Q9BX51 225 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 COMMD5Q9GZQ3 224 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 FNDC4Q9H6D8 234 aaPredicted RBP4.53□□□□□ -1.68
SF3B3-210ENST00000567654 ENY2Q9NPA8 101 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 LSM4Q9Y4Z0 139 aaKnown RBP4.53□□□□□ -1.68
SF3B3-210ENST00000567654 PTPN13Q12923 2485 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 MAP1AP78559 2803 aaPredicted RBP4.53□□□□□ -1.68
SF3B3-210ENST00000567654 ABCA12Q86UK0 2595 aa4.53□□□□□ -1.68
SF3B3-210ENST00000567654 CENPEQ02224 2701 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 CSPG4Q6UVK1 2322 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 IGKV1D-37A0A075B6S9 117 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 IGHV3-21A0A0B4J1V1 117 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 LOC102723971A0A1B0GUV8 181 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 SH2D7A6NKC9 451 aaPredicted RBP4.52□□□□□ -1.69
SF3B3-210ENST00000567654 UMAD1C9J7I0 102 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 NPFFO15130 113 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 NBR2O15453 112 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 NUDT3O95989 172 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 MOSP00540 346 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 CD5P06127 495 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 OR13C7P0DN81 318 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 GATA2P23769 480 aaPredicted RBP4.52□□□□□ -1.69
SF3B3-210ENST00000567654 RAB5CP51148 216 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 RAB11AP62491 216 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 EBI3Q14213 229 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 GAMTQ14353 236 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 HES1Q14469 280 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 MMDQ15546 238 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 GUK1Q16774 197 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 TMEM41BQ5BJD5 291 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 KLF17Q5JT82 389 aaPredicted RBP4.52□□□□□ -1.69
SF3B3-210ENST00000567654 FFAR4Q5NUL3 377 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 MINOS1Q5TGZ0 78 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 ASPHD1Q5U4P2 390 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 SPATA31B1PQ5VZV4 182 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 MIC13Q5XKP0 118 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 PVRIGQ6DKI7 326 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 FAM122CQ6P4D5 195 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 LCN15Q6UWW0 184 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 MMD2Q8IY49 270 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 RPP25LQ8N5L8 163 aaKnown RBP4.52□□□□□ -1.69
SF3B3-210ENST00000567654 NPBQ8NG41 125 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 OR2T6Q8NHC8 308 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 VSTM2AQ8TAG5 236 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 GATAD1Q8WUU5 269 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 SSMEM1Q8WWF3 244 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 SRSF12Q8WXF0 261 aaKnown RBP4.52□□□□□ -1.69
SF3B3-210ENST00000567654 RARRES2Q99969 163 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 KLK15Q9H2R5 256 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 SLC25A22Q9H936 323 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 FKBP11Q9NYL4 201 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 TBL2Q9Y4P3 447 aaKnown RBP4.52□□□□□ -1.69
SF3B3-210ENST00000567654 MINOS1-NBL1R4GNA1 71 aa4.52□□□□□ -1.69
SF3B3-210ENST00000567654 IGHV1-69DA0A0B4J2H0 117 aa4.51□□□□□ -1.69
SF3B3-210ENST00000567654 A0A0U1RQK1 487 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms