RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SNRNP40Q96DI7 357 aaKnown RBP16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 OSTCQ9NRP0 149 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 DSCAMO60469 2012 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 ADH4P08319 380 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 APELAP0DMC3 54 aa16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 KLF3P57682 345 aaPredicted RBP16.76■□□□□ 0.27
MAP1LC3B-206ENST00000564844 SELENOVP59797 346 aa16.75■□□□□ 0.27
MAP1LC3B-206ENST00000564844 CT45A1Q5HYN5 189 aa16.75■□□□□ 0.27
MAP1LC3B-206ENST00000564844 DHRS13Q6UX07 377 aa16.75■□□□□ 0.27
MAP1LC3B-206ENST00000564844 CT45A3Q8NHU0 189 aa16.75■□□□□ 0.27
MAP1LC3B-206ENST00000564844 ORAOV1Q8WV07 137 aa16.75■□□□□ 0.27
MAP1LC3B-206ENST00000564844 KLF13Q9Y2Y9 288 aaPredicted RBP16.75■□□□□ 0.27
MAP1LC3B-206ENST00000564844 ACACAQ13085 2346 aa16.75■□□□□ 0.27
MAP1LC3B-206ENST00000564844 TMEM167BQ9NRX6 74 aa16.75■□□□□ 0.27
MAP1LC3B-206ENST00000564844 TNFRSF19Q9NS68 423 aa16.75■□□□□ 0.27
MAP1LC3B-206ENST00000564844 ISLRO14498 428 aa16.74■□□□□ 0.27
MAP1LC3B-206ENST00000564844 NUDT3O95989 172 aa16.74■□□□□ 0.27
MAP1LC3B-206ENST00000564844 VPS25Q9BRG1 176 aa16.74■□□□□ 0.27
MAP1LC3B-206ENST00000564844 HIGD1CA8MV81 97 aa16.74■□□□□ 0.27
MAP1LC3B-206ENST00000564844 IDI2-AS1Q9NZ38 188 aa16.74■□□□□ 0.27
MAP1LC3B-206ENST00000564844 TRGV5A0A0B4J1U4 118 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 SRRM4A7MD48 611 aaKnown RBP16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 HOXC12P31275 282 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 REG1BP48304 166 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 TMPRSS3P57727 454 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 UBE2G1P62253 170 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 LDLRAD2Q5SZI1 272 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 VWA1Q6PCB0 445 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 NUDT10Q8NFP7 164 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 OR4S2Q8NH73 311 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 NUDT11Q96G61 164 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 ABI3Q9P2A4 366 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 COLQQ9Y215 455 aaPredicted RBP16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 TRAV9-2A0A087WT02 112 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 IZUMO1RA6ND01 250 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 OR2T8A6NH00 312 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 CSN3P07498 182 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 GABRA6Q16445 453 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 ARRDC1-AS1Q9H2J1 176 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 NCOR1P1Q9H4R4 102 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 IGHV2OR16-5A0A0B4J2B6 119 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 SMIM27A0A1W2PRY6 76 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 VWC2LB2RUY7 222 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 LOXL3P58215 753 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 MOGAT3Q86VF5 341 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 ASCL2Q99929 193 aa16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 AMMECR1Q9Y4X0 333 aaPredicted RBP16.73■□□□□ 0.27
MAP1LC3B-206ENST00000564844 IGHV3-21A0A0B4J1V1 117 aa16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 SPRY3O43610 288 aa16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 PPOXP50336 477 aa16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 SRSF6Q13247 344 aaKnown RBP16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 WDR31Q8NA23 367 aa16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 MMP23AO75900 390 aa16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 PSG1P11464 419 aa16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 TNFSF4P23510 183 aa16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 C19orf35Q6ZS72 473 aa16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 OR4F17Q8NGA8 305 aa16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 OR5B3Q8NH48 314 aa16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 ZNF596Q8TC21 504 aa16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 CALYQ9NYX4 217 aa16.72■□□□□ 0.27
MAP1LC3B-206ENST00000564844 A0A1W2PNU3 283 aaPredicted RBP16.71■□□□□ 0.27
MAP1LC3B-206ENST00000564844 OR4C46A6NHA9 309 aa16.71■□□□□ 0.27
MAP1LC3B-206ENST00000564844 CECR9P0C854 216 aa16.71■□□□□ 0.27
MAP1LC3B-206ENST00000564844 IGHV2-26A0A0B4J1V2 119 aa16.71■□□□□ 0.27
MAP1LC3B-206ENST00000564844 SSX8Q7RTT4 187 aa16.7■□□□□ 0.26
MAP1LC3B-206ENST00000564844 FAM90A1Q86YD7 464 aa16.7■□□□□ 0.26
MAP1LC3B-206ENST00000564844 IGF2BP2-AS1Q96M15 143 aa16.7■□□□□ 0.26
MAP1LC3B-206ENST00000564844 TNFSF15O95150 251 aa16.7■□□□□ 0.26
MAP1LC3B-206ENST00000564844 C10orf55Q5SWW7 151 aa16.7■□□□□ 0.26
MAP1LC3B-206ENST00000564844 SLC25A33Q9BSK2 321 aa16.7■□□□□ 0.26
MAP1LC3B-206ENST00000564844 MUC21A0A0G2JKD1 596 aa16.69■□□□□ 0.26
MAP1LC3B-206ENST00000564844 MUC21A0A140T8X8 626 aa16.69■□□□□ 0.26
MAP1LC3B-206ENST00000564844 IGLC7A0M8Q6 106 aa16.69■□□□□ 0.26
MAP1LC3B-206ENST00000564844 E7EUB6 86 aa16.69■□□□□ 0.26
MAP1LC3B-206ENST00000564844 REG1AP05451 166 aa16.69■□□□□ 0.26
MAP1LC3B-206ENST00000564844 C8orf88P0DMB2 117 aa16.69■□□□□ 0.26
MAP1LC3B-206ENST00000564844 MSMPQ1L6U9 139 aa16.69■□□□□ 0.26
MAP1LC3B-206ENST00000564844 MUC21Q5SSG8 566 aa16.69■□□□□ 0.26
MAP1LC3B-206ENST00000564844 LY96Q9Y6Y9 160 aa16.69■□□□□ 0.26
MAP1LC3B-206ENST00000564844 C2orf70A6NJV1 201 aa16.69■□□□□ 0.26
MAP1LC3B-206ENST00000564844 CHODLQ9H9P2 273 aa16.69■□□□□ 0.26
MAP1LC3B-206ENST00000564844 TMEM14BQ9NUH8 114 aa16.69■□□□□ 0.26
MAP1LC3B-206ENST00000564844 KLRC4-KLRK1H3BQV0 150 aa16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 FOXE3Q13461 319 aa16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 AMMECR1LQ6DCA0 310 aa16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 PGLYRP4Q96LB8 373 aa16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 CCL11P51671 97 aa16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 TBR1Q16650 682 aa16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 GCSAMQ8N6F7 178 aa16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 JPT1Q9UK76 154 aa16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 A0A087X0K7 114 aa16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 TAS2R45P59539 299 aa16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 NAA38Q9BRA0 125 aaKnown RBP16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 MRPS16Q9Y3D3 137 aaKnown RBP16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 CHTOPQ9Y3Y2 248 aaKnown RBP16.68■□□□□ 0.26
MAP1LC3B-206ENST00000564844 ABCA4P78363 2273 aa16.67■□□□□ 0.26
MAP1LC3B-206ENST00000564844 SVEP1Q4LDE5 3571 aa16.67■□□□□ 0.26
MAP1LC3B-206ENST00000564844 ORM2P19652 201 aa16.67■□□□□ 0.26
MAP1LC3B-206ENST00000564844 TMEM164Q5U3C3 297 aa16.67■□□□□ 0.26
MAP1LC3B-206ENST00000564844 OR2V2Q96R30 315 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms