RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 WT1-ASQ06250 92 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 TCF24Q7RTU0 167 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 DHRSXQ8N5I4 330 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 PACRGLQ8N7B6 248 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 OR10W1Q8NGF6 305 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 OR4B1Q8NGF8 309 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 VN1R17PQ8TDU5 208 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 GRAMD2BQ96HH9 432 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 HSD17B10Q99714 261 aaKnown RBP6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 PRELID3BQ9Y3B1 194 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 RBM7Q9Y580 266 aaKnown RBP6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 V9GY05 133 aa6.93□□□□□ -1.3
HDGFL3-204ENST00000563790 TRAV26-1A0A087WT03 109 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 SCO2A0A1W2PP80 73 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 A0A1W2PS18 150 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 DPPA5A6NC42 116 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 OR2T8A6NH00 312 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 K7EIM0 57 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 SSX5O60225 188 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 NXPH4O95158 308 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 DHFRP00374 187 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 CTSGP08311 255 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 FGF2P09038 288 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 HES5Q5TA89 166 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 TPRA1Q86W33 373 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 C8orf59Q8N0T1 100 aaPredicted RBP6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 GDPD1Q8N9F7 314 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 BSCL2Q96G97 398 aaPredicted RBP6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 OR10C1Q96KK4 312 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 ATP6V0BQ99437 205 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 DCUN1D5Q9BTE7 237 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 SPATA2Q9UM82 520 aa6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 MRPS7Q9Y2R9 242 aaKnown RBP6.92□□□□□ -1.3
HDGFL3-204ENST00000563790 A0A075B6Q4 140 aa6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 IGHV3-49A0A0A0MS15 119 aa6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 CBY3A6NI87 242 aa6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 IFITM5A6NNB3 132 aa6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 UPK2O00526 184 aa6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 RBFOX2O43251 390 aaKnown RBP eCLIP6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 SLC22A5O76082 557 aa6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 CD36P16671 472 aa6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 RAB6AP20340 208 aa6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 CALRP27797 417 aaKnown RBP6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 SSX1Q16384 188 aa6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 CMTM1Q8IZ96 169 aa6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 TCTEX1D2Q8WW35 142 aa6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 TAS2R8Q9NYW2 309 aa6.91□□□□□ -1.3
HDGFL3-204ENST00000563790 H3BNG1 76 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 ARL6IP5O75915 188 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 HRASP01112 189 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 SERPINE2P07093 398 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 DEFA4P12838 97 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 CRHBPP24387 322 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 MSMO1Q15800 293 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 RRN3P1Q2M238 152 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 OGFRL1Q5TC84 451 aaPredicted RBP6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 SPSB3Q6PJ21 355 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 DUSP18Q8NEJ0 188 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 NUDCD2Q8WVJ2 157 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 UFD1Q92890 307 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 DUSP21Q9H596 190 aa6.9□□□□□ -1.3
HDGFL3-204ENST00000563790 IGHV3-21A0A0B4J1V1 117 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 PTGES3LE9PB15 166 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 CTXN2P0C2S0 81 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 ZNF688P0C7X2 276 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 PTHLHP12272 177 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 M6PRP20645 277 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 GADD45AP24522 165 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 MRPS15P82914 257 aaKnown RBP6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 MLLT11Q13015 90 aaPredicted RBP6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 CDNFQ49AH0 187 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 HACD4Q5VWC8 232 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 CNIH2Q6PI25 160 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 C10orf67Q8IYJ2 551 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 CENPOQ9BU64 300 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 QTRT1Q9BXR0 403 aaKnown RBP6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 DCSTAMPQ9H295 470 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 C8orf4Q9NR00 106 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 CCL28Q9NRJ3 127 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 NDUFA4L2Q9NRX3 87 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 C21orf62Q9NYP8 219 aa6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 F11RQ9Y624 299 aaKnown RBP6.89□□□□□ -1.31
HDGFL3-204ENST00000563790 TRAV1-2A0A0B4J238 106 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 TEX50A0A1B0GTY4 177 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 TMEM235A6NFC5 223 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 K7EQG2 157 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 CASQ2O14958 399 aaPredicted RBP6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 TNFSF12O43508 249 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 FCER2P06734 321 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 OR13C7P0DN81 318 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 PSMA1P25786 263 aaKnown RBP6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 TAS2R31P59538 309 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 TRAM1Q15629 374 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 SPAG16Q8N0X2 631 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 VSIRQ9H7M9 311 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 SDF2L1Q9HCN8 221 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 TMEM140Q9NV12 185 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 THYN1Q9P016 225 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 RABAC1Q9UI14 185 aa6.88□□□□□ -1.31
HDGFL3-204ENST00000563790 ANXA10Q9UJ72 324 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms