RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 C3P01024 1663 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 THSD7AQ9UPZ6 1657 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 VWDEQ8N2E2 1590 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 UGGT1Q9NYU2 1555 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 NLRP1Q9C000 1473 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 CHD4Q14839 1912 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 MIA3Q5JRA6 1907 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 IGLV3-10A0A075B6K4 115 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 A0A087WX48 190 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 A0A096LPI6 279 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 A0A0D9SG52 128 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 C7orf71A4D174 169 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 C17orf51A8MQB3 221 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 BBIP1A8MTZ0 92 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 H3BMM0 161 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 HIST1H2BKO60814 126 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 LY6HO94772 140 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 TCL1BO95988 128 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 IGHV3-7P01780 117 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 HIST1H2BJP06899 126 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 MSMBP08118 114 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 SCTP09683 121 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 IGHV3-30-3P0DP02 117 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 ZNF25P17030 456 aaPredicted RBP1.39□□□□□ -2.19
RTF1-207ENST00000561076 RPS3P23396 243 aaKnown RBP eCLIP1.39□□□□□ -2.19
RTF1-207ENST00000561076 KDELR1P24390 212 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 CRYBB3P26998 211 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 PSMB8P28062 276 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 RPL35P42766 123 aaKnown RBP1.39□□□□□ -2.19
RTF1-207ENST00000561076 AQP4P55087 323 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 RBM11P57052 281 aaKnown RBP1.39□□□□□ -2.19
RTF1-207ENST00000561076 DNAJB13P59910 316 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 ELF3P78545 371 aaPredicted RBP1.39□□□□□ -2.19
RTF1-207ENST00000561076 EMX2Q04743 252 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 MIAQ16674 131 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 XP32Q5T750 250 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 GFI1BQ5VTD9 330 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 SPATA12Q7Z6I5 190 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 CTAGE3PQ8IX95 158 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 PDZD9Q8IXQ8 264 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 ZNF664Q8N3J9 261 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 LINC00471Q8N535 108 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 C12orf45Q8N5I9 185 aaPredicted RBP1.39□□□□□ -2.19
RTF1-207ENST00000561076 C3orf22Q8N5N4 141 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 ZFAND2AQ8N6M9 145 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 CNEP1R1Q8N9A8 125 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 Q8N9P0 234 aaPredicted RBP1.39□□□□□ -2.19
RTF1-207ENST00000561076 ZFP62Q8NB50 900 aaPredicted RBP1.39□□□□□ -2.19
RTF1-207ENST00000561076 SLC30A7Q8NEW0 376 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 OR52R1Q8NGF1 315 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 OR4B1Q8NGF8 309 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 OR4K15Q8NH41 348 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 TMEM106AQ96A25 262 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 UBE2WQ96B02 151 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 TEX37Q96LM6 180 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 B9D2Q9BPU9 175 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 NPCDR1Q9BY65 106 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 RERGLQ9H628 205 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 RNF122Q9H9V4 155 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 TAF9BQ9HBM6 251 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 ZNF580Q9UK33 172 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 KLK5Q9Y337 293 aaPredicted RBP1.39□□□□□ -2.19
RTF1-207ENST00000561076 SOX21Q9Y651 276 aaPredicted RBP1.39□□□□□ -2.19
RTF1-207ENST00000561076 RICTORQ6R327 1708 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 LRP6O75581 1613 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 CACNA1AO00555 2505 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 ABCC1P33527 1531 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 ARHGAP5Q13017 1502 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 SRCAPQ6ZRS2 3230 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 TECPR2O15040 1411 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 HCFC1P51610 2035 aa1.39□□□□□ -2.19
RTF1-207ENST00000561076 NWD1Q149M9 1564 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 REREQ9P2R6 1566 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 MYO5BQ9ULV0 1848 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 A2MP01023 1474 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 SCAF11Q99590 1463 aaKnown RBP1.38□□□□□ -2.19
RTF1-207ENST00000561076 IBTKQ9P2D0 1353 aaPredicted RBP1.38□□□□□ -2.19
RTF1-207ENST00000561076 LRP5O75197 1615 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 RAPGEF6Q8TEU7 1601 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 ALKQ9UM73 1620 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 MEIKINA0A087WXM9 373 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 TRAV13-1A0A0B4J241 112 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 IGHV1-58A0A0C4DH39 117 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 A0A0J9YW62 118 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 ODAMA1E959 279 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 C20orf202A1L168 122 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 ARRDC5A6NEK1 342 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 TMEM235A6NFC5 223 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 ZNF860A6NHJ4 632 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 TMEM212A6NML5 194 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 A8MWP4 228 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 F6UZH7 168 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 H3BMG7 143 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 H3BT86 120 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 TMEM256-PLSCR3K7ERE1 68 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 GNG7O60262 68 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 SNAPC5O75971 98 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 IGKV1-5P01602 117 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 IGKV3-15P01624 115 aa1.38□□□□□ -2.19
RTF1-207ENST00000561076 IGHV3-53P01767 116 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms