RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 SUB1P53999 127 aaKnown RBP eCLIP4.25□□□□□ -1.73
ZEB1-220ENST00000560909 RPL23AP62750 156 aaKnown RBP4.25□□□□□ -1.73
ZEB1-220ENST00000560909 GNB1P62873 340 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 RPP30P78346 268 aaKnown RBP4.25□□□□□ -1.73
ZEB1-220ENST00000560909 BAXQ07812 192 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 ARL16Q0P5N6 197 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 FHL2Q14192 279 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 VWC2Q2TAL6 325 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 SPINK9Q5DT21 86 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 TCTEX1D4Q5JR98 221 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 UNQ5815/PRO19632Q6UWF5 114 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 LURAP1LQ8IV03 231 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 NECAP1Q8NC96 275 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 TMEM116Q8NCL8 245 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 SLC24A4Q8NFF2 622 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 OR4F5Q8NH21 305 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 OR2T6Q8NHC8 308 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 THAP6Q8TBB0 222 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 VN1R17PQ8TDU5 208 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 PPP1R14BQ96C90 147 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 HYLS1Q96M11 299 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 NOL4LQ96MY1 436 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-220ENST00000560909 GGACTQ9BVM4 153 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 FNDC4Q9H6D8 234 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-220ENST00000560909 SLA2Q9H6Q3 261 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 ENY2Q9NPA8 101 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 HEYLQ9NQ87 328 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-220ENST00000560909 PARP11Q9NR21 331 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 TNFRSF19Q9NS68 423 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 PSENENQ9NZ42 101 aa4.25□□□□□ -1.73
ZEB1-220ENST00000560909 STRAPQ9Y3F4 350 aaKnown RBP4.25□□□□□ -1.73
ZEB1-220ENST00000560909 LSM5Q9Y4Y9 91 aaKnown RBP4.25□□□□□ -1.73
ZEB1-220ENST00000560909 PSMB11A5LHX3 300 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 FAM24AA6NFZ4 105 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 FAM223BA6NKX1 122 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 SMLR1H3BR10 107 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 SCGB1D2O95969 90 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 ATF4P18848 351 aaPredicted RBP4.24□□□□□ -1.73
ZEB1-220ENST00000560909 RPL12P30050 165 aaKnown RBP4.24□□□□□ -1.73
ZEB1-220ENST00000560909 SNCAP37840 140 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 HOXA1P49639 335 aaPredicted RBP4.24□□□□□ -1.73
ZEB1-220ENST00000560909 SULT1A1P50225 295 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 RAB9AP51151 201 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 S100A10P60903 97 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 DLK1P80370 383 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 RUNX1Q01196 453 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 CD69Q07108 199 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 OR2F1Q13607 317 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 EXOSC2Q13868 293 aaKnown RBP4.24□□□□□ -1.73
ZEB1-220ENST00000560909 ZNF345Q14585 488 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 ATP6V1FQ16864 119 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 TMEM95Q3KNT9 176 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 C9orf152Q5JTZ5 239 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 SPANXN5Q5MJ07 72 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 LAMTOR1Q6IAA8 161 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 TEX38Q6PEX7 206 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 ETV3LQ6ZN32 361 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 C19orf35Q6ZS72 473 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 ACOT7LQ6ZUV0 252 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 ZNF546Q86UE3 836 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 FAM223AQ8IWN6 122 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 KCNRGQ8N5I3 272 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 OR5T1Q8NG75 326 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 ZNF414Q96IQ9 312 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 USMG5Q96IX5 58 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 TXN2Q99757 166 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 HINT2Q9BX68 163 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 PARD6GQ9BYG4 376 aaPredicted RBP4.24□□□□□ -1.73
ZEB1-220ENST00000560909 SLC25A31Q9H0C2 315 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 KLK15Q9H2R5 256 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 LINC00527Q9UJ94 153 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 LSM4Q9Y4Z0 139 aaKnown RBP4.24□□□□□ -1.73
ZEB1-220ENST00000560909 HSPB11Q9Y547 144 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 VWFP04275 2813 aa4.24□□□□□ -1.73
ZEB1-220ENST00000560909 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.23□□□□□ -1.73
ZEB1-220ENST00000560909 A0A0G2JLM5 398 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 L7N2F9 121 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 CYB5BO43169 146 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 NXPH3O95157 252 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 NDUFB8O95169 186 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 IFNA10P01566 189 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 REG1AP05451 166 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 METTL15P1P0C7V9 234 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 CXCL2P19875 107 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 S100A11P31949 105 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 CDX1P47902 265 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-220ENST00000560909 RAB11AP62491 216 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 VAMP2P63027 116 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 SLC35B1P78383 322 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 RHOGP84095 191 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 EWSR1Q01844 656 aaKnown RBP eCLIP4.23□□□□□ -1.73
ZEB1-220ENST00000560909 NHLH2Q02577 135 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 FOXL1Q12952 345 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 GAMTQ14353 236 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 ECSCRQ19T08 205 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 KRTAP24-1Q3LI83 254 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 LGALSLQ3ZCW2 172 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-220ENST00000560909 LRRC37A5PQ49AS3 106 aa4.23□□□□□ -1.73
ZEB1-220ENST00000560909 FAM209BQ5JX69 171 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms