RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-222	ENST00000560731	KIAA1456	Q9P272	454 aa		6.11	□□□□□ -1.43
MARK3-222	ENST00000560731	WDR83OS	Q9Y284	106 aa		6.11	□□□□□ -1.43
MARK3-222	ENST00000560731	RFNG	Q9Y644	331 aa		6.11	□□□□□ -1.43
MARK3-222	ENST00000560731	MFSD2B	A6NFX1	497 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	ZNF705E	A8MWA4	302 aa	Predicted RBP	6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	ACTL6B	O94805	426 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	SLPI	P03973	132 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	OR13C7	P0DN81	318 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	IGHV4-38-2	P0DP08	117 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	SUB1	P53999	127 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	RUNX1	Q01196	453 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	HES1	Q14469	280 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	TNXA	Q16473	311 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	AANAT	Q16613	207 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	TMEM249	Q2WGJ8	235 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	SLC25A24	Q6NUK1	477 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	DPPA3	Q6W0C5	159 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	COMMD7	Q86VX2	200 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731		Q8N9W7	124 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	ZNF114	Q8NC26	417 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	PIFO	Q8TCI5	191 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	RNASEH2C	Q8TDP1	164 aa	Known RBP	6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	MARC2	Q969Z3	335 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	P2RX4	Q99571	388 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	RSG1	Q9BU20	258 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	6.1	□□□□□ -1.43	3e-14	■■■■■ 53.1
MARK3-222	ENST00000560731	APC	P25054	2843 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	PLXNB1	O43157	2135 aa		6.1	□□□□□ -1.43
MARK3-222	ENST00000560731	CELSR2	Q9HCU4	2923 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731		A0A0U1RQK1	487 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	RAB19	A4D1S5	217 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	SOX15	O60248	233 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	MPDU1	O75352	247 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	TGFA	P01135	160 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	CRYGC	P07315	174 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	TMEM11	P17152	192 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	CX3CL1	P78423	397 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	FXYD3	Q14802	87 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	PLGLA	Q15195	96 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	PXDC1	Q5TGL8	231 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	RUSC1-AS1	Q66K80	236 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	TMEM182	Q6ZP80	229 aa	Predicted RBP	6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	TMEM144	Q7Z5S9	345 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	OR1P1	Q8NH06	330 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	SRSF12	Q8WXF0	261 aa	Known RBP	6.09	□□□□□ -1.43
MARK3-222	ENST00000560731		Q96MF0	132 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	FOXC2	Q99958	501 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	FBXO7	Q9Y3I1	522 aa		6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	LSM4	Q9Y4Z0	139 aa	Known RBP	6.09	□□□□□ -1.43
MARK3-222	ENST00000560731	CRYBG3	Q68DQ2	2970 aa		6.09	□□□□□ -1.44
MARK3-222	ENST00000560731	PRRC2A	P48634	2157 aa	Known RBP	6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	IGHV3OR16-10	A0A075B7F0	116 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	TRAV1-1	A0A0B4J248	108 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	TRAV40	A0A0B4J280	105 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	UBE2L5P	A0A1B0GUS4	154 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	NCBP2L	A6PVI3	153 aa	Known RBP	6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	C17orf112	F2Z3M2	114 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	TSPAN9	O75954	239 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	CNIH1	O95406	144 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	HLA-DRB1	P01911	266 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	MB	P02144	154 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	EGR2	P11161	476 aa	Predicted RBP	6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	AREG	P15514	252 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	CTRB1	P17538	263 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	FGF7	P21781	194 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	CAMLG	P49069	296 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	FHIT	P49789	147 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	MFAP2	P55001	183 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	GNB1	P62873	340 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	FHL3	Q13643	280 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	GAMT	Q14353	236 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	AKR1C8P	Q5T2L2	129 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	CYB5R2	Q6BCY4	276 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	CTRB2	Q6GPI1	263 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	BRD3OS	Q6XYD6	125 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	IL34	Q6ZMJ4	242 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731		Q6ZRG5	221 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	COMMD1	Q8N668	190 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	ZNF709	Q8N972	641 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	MAPK1IP1L	Q8NDC0	245 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	MBD3L1	Q8WWY6	194 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	ZNF503	Q96F45	646 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	RBM14	Q96PK6	669 aa	Known RBP	6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	NPCDR1	Q9BY65	106 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	RPRM	Q9NS64	109 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	FAM96B	Q9Y3D0	163 aa		6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	F11R	Q9Y624	299 aa	Known RBP	6.08	□□□□□ -1.44
MARK3-222	ENST00000560731	CSPG4	Q6UVK1	2322 aa		6.07	□□□□□ -1.44
MARK3-222	ENST00000560731	IGHV7-81	A0A0B4J1V7	117 aa		6.07	□□□□□ -1.44
MARK3-222	ENST00000560731	NPIPB5	A8MRT5	1133 aa		6.07	□□□□□ -1.44
MARK3-222	ENST00000560731	PRH1	P02810	166 aa		6.07	□□□□□ -1.44
MARK3-222	ENST00000560731	FBP1	P09467	338 aa		6.07	□□□□□ -1.44
MARK3-222	ENST00000560731	OPRK1	P41145	380 aa		6.07	□□□□□ -1.44
MARK3-222	ENST00000560731	RPL29	P47914	159 aa	Known RBP	6.07	□□□□□ -1.44
MARK3-222	ENST00000560731	RAB31	Q13636	194 aa		6.07	□□□□□ -1.44
MARK3-222	ENST00000560731	KLK9	Q2XQG4	91 aa		6.07	□□□□□ -1.44
MARK3-222	ENST00000560731	TMEM41B	Q5BJD5	291 aa		6.07	□□□□□ -1.44
MARK3-222	ENST00000560731	ETFRF1	Q6IPR1	90 aa		6.07	□□□□□ -1.44
MARK3-222	ENST00000560731	SPSB3	Q6PJ21	355 aa		6.07	□□□□□ -1.44
MARK3-222	ENST00000560731	UQCC3	Q6UW78	93 aa		6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms