RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 GNRHRP30968 328 aa9.9□□□□□ -0.82
ACTN1-219ENST00000556432 SNRPD3P62318 126 aaKnown RBP9.9□□□□□ -0.82
ACTN1-219ENST00000556432 ERHP84090 104 aaKnown RBP9.9□□□□□ -0.82
ACTN1-219ENST00000556432 FAM222AQ5U5X8 452 aa9.9□□□□□ -0.82
ACTN1-219ENST00000556432 SPATA12Q7Z6I5 190 aa9.9□□□□□ -0.82
ACTN1-219ENST00000556432 ZNF114Q8NC26 417 aa9.9□□□□□ -0.82
ACTN1-219ENST00000556432 LGALS14Q8TCE9 139 aa9.9□□□□□ -0.82
ACTN1-219ENST00000556432 TMEM230Q96A57 120 aa9.9□□□□□ -0.82
ACTN1-219ENST00000556432 YTHDF1Q9BYJ9 559 aaKnown RBP9.9□□□□□ -0.82
ACTN1-219ENST00000556432 RFNGQ9Y644 331 aa9.9□□□□□ -0.82
ACTN1-219ENST00000556432 NOTOA8MTQ0 251 aa9.89□□□□□ -0.83
ACTN1-219ENST00000556432 SCGB2A1O75556 95 aa9.89□□□□□ -0.83
ACTN1-219ENST00000556432 CRYBB3P26998 211 aa9.89□□□□□ -0.83
ACTN1-219ENST00000556432 FAM3BP58499 235 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-219ENST00000556432 TBCEQ15813 527 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-219ENST00000556432 KCTD21Q4G0X4 260 aa9.89□□□□□ -0.83
ACTN1-219ENST00000556432 SPINK9Q5DT21 86 aa9.89□□□□□ -0.83
ACTN1-219ENST00000556432 H2BFWTQ7Z2G1 175 aa9.89□□□□□ -0.83
ACTN1-219ENST00000556432 CMTM1Q8IZ96 169 aa9.89□□□□□ -0.83
ACTN1-219ENST00000556432 RHBDL2Q9NX52 303 aa9.89□□□□□ -0.83
ACTN1-219ENST00000556432 EHFQ9NZC4 300 aa9.89□□□□□ -0.83
ACTN1-219ENST00000556432 DKK2Q9UBU2 259 aa9.89□□□□□ -0.83
ACTN1-219ENST00000556432 BLOC1S6Q9UL45 172 aa9.89□□□□□ -0.83
ACTN1-219ENST00000556432 NBDYA0A0U1RRE5 68 aa9.88□□□□□ -0.83
ACTN1-219ENST00000556432 TMEM50AO95807 157 aa9.88□□□□□ -0.83
ACTN1-219ENST00000556432 IGKV3-20P01619 116 aa9.88□□□□□ -0.83
ACTN1-219ENST00000556432 SNCAP37840 140 aa9.88□□□□□ -0.83
ACTN1-219ENST00000556432 FXYD7P58549 80 aa9.88□□□□□ -0.83
ACTN1-219ENST00000556432 GABARAPL2P60520 117 aa9.88□□□□□ -0.83
ACTN1-219ENST00000556432 PRCDQ00LT1 54 aa9.88□□□□□ -0.83
ACTN1-219ENST00000556432 CADM3Q8N126 398 aa9.88□□□□□ -0.83
ACTN1-219ENST00000556432 OR5AP2Q8NGF4 316 aa9.88□□□□□ -0.83
ACTN1-219ENST00000556432 NEU1Q99519 415 aa9.88□□□□□ -0.83
ACTN1-219ENST00000556432 IFT46Q9NQC8 304 aa9.88□□□□□ -0.83
ACTN1-219ENST00000556432 NDUFB11Q9NX14 153 aa9.88□□□□□ -0.83
ACTN1-219ENST00000556432 TRDV1A0A1B0GX56 115 aa9.87□□□□□ -0.83
ACTN1-219ENST00000556432 MEIS3P1A6NDR6 274 aa9.87□□□□□ -0.83
ACTN1-219ENST00000556432 SMIM9A6NGZ8 99 aa9.87□□□□□ -0.83
ACTN1-219ENST00000556432 EPM2AB3EWF7 344 aa9.87□□□□□ -0.83
ACTN1-219ENST00000556432 H3BMM0 161 aa9.87□□□□□ -0.83
ACTN1-219ENST00000556432 ZNF705AQ6ZN79 300 aaPredicted RBP9.87□□□□□ -0.83
ACTN1-219ENST00000556432 ZNF2Q9BSG1 426 aaPredicted RBP9.87□□□□□ -0.83
ACTN1-219ENST00000556432 APOBP04114 4563 aaKnown RBP9.86□□□□□ -0.83
ACTN1-219ENST00000556432 ZNF705FA8MVS1 300 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-219ENST00000556432 FAM90A26D6RGX4 464 aa9.86□□□□□ -0.83
ACTN1-219ENST00000556432 ZNF705DP0CH99 300 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-219ENST00000556432 ZNF705BP0CI00 300 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-219ENST00000556432 S100GP29377 79 aa9.86□□□□□ -0.83
ACTN1-219ENST00000556432 HSPE1P61604 102 aaKnown RBP9.86□□□□□ -0.83
ACTN1-219ENST00000556432 DAD1P61803 113 aa9.86□□□□□ -0.83
ACTN1-219ENST00000556432 PHLDA2Q53GA4 152 aa9.86□□□□□ -0.83
ACTN1-219ENST00000556432 GSG1LQ6UXU4 331 aa9.86□□□□□ -0.83
ACTN1-219ENST00000556432 SPARTQ8N0X7 666 aa9.86□□□□□ -0.83
ACTN1-219ENST00000556432 SLC35G3Q8N808 338 aa9.86□□□□□ -0.83
ACTN1-219ENST00000556432 C15orf53Q8NAA6 179 aa9.86□□□□□ -0.83
ACTN1-219ENST00000556432 GPR31O00270 319 aa9.85□□□□□ -0.83
ACTN1-219ENST00000556432 INAFM2P0DMQ5 153 aa9.85□□□□□ -0.83
ACTN1-219ENST00000556432 OPRK1P41145 380 aa9.85□□□□□ -0.83
ACTN1-219ENST00000556432 CBX5P45973 191 aa9.85□□□□□ -0.83
ACTN1-219ENST00000556432 RFX2P48378 723 aa9.85□□□□□ -0.83
ACTN1-219ENST00000556432 AP2S1P53680 142 aaPredicted RBP9.85□□□□□ -0.83
ACTN1-219ENST00000556432 C7orf50Q9BRJ6 194 aaKnown RBP9.85□□□□□ -0.83
ACTN1-219ENST00000556432 YTHDF2Q9Y5A9 579 aaKnown RBP9.85□□□□□ -0.83
ACTN1-219ENST00000556432 LOC102723971A0A1B0GUV8 181 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 CLN5O75503 358 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 HBE1P02100 147 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 HLA-DRB4P13762 266 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 PSMB9P28065 219 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 SUB1P53999 127 aaKnown RBP eCLIP9.84□□□□□ -0.83
ACTN1-219ENST00000556432 TIGITQ495A1 244 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 SFXN4Q6P4A7 337 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 GLMPQ8WWB7 406 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 MRGPRFQ96AM1 343 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 SEC22AQ96IW7 307 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 AUNIPQ9H7T9 357 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 NRN1Q9NPD7 142 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 HLA-DRB4X5D2U9 266 aa9.84□□□□□ -0.83
ACTN1-219ENST00000556432 RPS10-NUDT3A0A1W2PQS6 291 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 CORTO00230 105 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 NUDT3O95989 172 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 PMP2P02689 132 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 HNRNPCP07910 306 aaKnown RBP eCLIP9.83□□□□□ -0.84
ACTN1-219ENST00000556432 OXA1LQ15070 435 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 NEDD8Q15843 81 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 C16orf54Q6UWD8 224 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 OR5H2Q8NGV7 314 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 ZNRF2Q8NHG8 242 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 SLC25A38Q96DW6 304 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 FXYD6Q9H0Q3 95 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 DIABLOQ9NR28 239 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 MRPL36Q9P0J6 103 aaKnown RBP9.83□□□□□ -0.84
ACTN1-219ENST00000556432 GOLT1BQ9Y3E0 138 aa9.83□□□□□ -0.84
ACTN1-219ENST00000556432 HOXA1P49639 335 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-219ENST00000556432 IZUMO4Q1ZYL8 232 aa9.82□□□□□ -0.84
ACTN1-219ENST00000556432 DHRS11Q6UWP2 260 aa9.82□□□□□ -0.84
ACTN1-219ENST00000556432 OR4B1Q8NGF8 309 aa9.82□□□□□ -0.84
ACTN1-219ENST00000556432 OR5H6Q8NGV6 325 aa9.82□□□□□ -0.84
ACTN1-219ENST00000556432 OR4X1Q8NH49 305 aa9.82□□□□□ -0.84
ACTN1-219ENST00000556432 PDCD10Q9BUL8 212 aa9.82□□□□□ -0.84
ACTN1-219ENST00000556432 ENY2Q9NPA8 101 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms