RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 A8MZ25 164 aa8.7□□□□□ -1.02
SLIRP-205ENST00000556310 NUPL2O15504 423 aaKnown RBP8.7□□□□□ -1.02
SLIRP-205ENST00000556310 CTSGP08311 255 aa8.7□□□□□ -1.02
SLIRP-205ENST00000556310 FRMD6-AS1P0C7T7 363 aa8.7□□□□□ -1.02
SLIRP-205ENST00000556310 C8orf88P0DMB2 117 aa8.7□□□□□ -1.02
SLIRP-205ENST00000556310 IGHV4-30-4P0DP06 118 aa8.7□□□□□ -1.02
SLIRP-205ENST00000556310 HTR2BP41595 481 aa8.7□□□□□ -1.02
SLIRP-205ENST00000556310 CCR6P51684 374 aa8.7□□□□□ -1.02
SLIRP-205ENST00000556310 RELQ04864 619 aaPredicted RBP8.7□□□□□ -1.02
SLIRP-205ENST00000556310 TM4SF20Q53R12 229 aa8.7□□□□□ -1.02
SLIRP-205ENST00000556310 BTNL8Q6UX41 500 aa8.7□□□□□ -1.02
SLIRP-205ENST00000556310 CENPSQ8N2Z9 138 aa8.7□□□□□ -1.02
SLIRP-205ENST00000556310 UXS1Q8NBZ7 420 aa8.7□□□□□ -1.02
SLIRP-205ENST00000556310 MRPL27Q9P0M9 148 aaKnown RBP8.7□□□□□ -1.02
SLIRP-205ENST00000556310 MLXQ9UH92 298 aa8.7□□□□□ -1.02
SLIRP-205ENST00000556310 ZNF785A8K8V0 405 aa8.69□□□□□ -1.02
SLIRP-205ENST00000556310 CEBPZOSA8MTT3 80 aa8.69□□□□□ -1.02
SLIRP-205ENST00000556310 GNG7O60262 68 aa8.69□□□□□ -1.02
SLIRP-205ENST00000556310 IGHV3-48P01763 117 aa8.69□□□□□ -1.02
SLIRP-205ENST00000556310 IL7P13232 177 aa8.69□□□□□ -1.02
SLIRP-205ENST00000556310 NPBWR1P48145 328 aa8.69□□□□□ -1.02
SLIRP-205ENST00000556310 UBE2MP61081 183 aaKnown RBP8.69□□□□□ -1.02
SLIRP-205ENST00000556310 SMCO1Q147U7 214 aa8.69□□□□□ -1.02
SLIRP-205ENST00000556310 LYZL2Q7Z4W2 148 aa8.69□□□□□ -1.02
SLIRP-205ENST00000556310 TMEM61Q8N0U2 210 aa8.69□□□□□ -1.02
SLIRP-205ENST00000556310 LRTM2Q8N967 370 aa8.69□□□□□ -1.02
SLIRP-205ENST00000556310 ZNF414Q96IQ9 312 aa8.69□□□□□ -1.02
SLIRP-205ENST00000556310 ASCL2Q99929 193 aa8.69□□□□□ -1.02
SLIRP-205ENST00000556310 C7orf50Q9BRJ6 194 aaKnown RBP8.69□□□□□ -1.02
SLIRP-205ENST00000556310 HEYLQ9NQ87 328 aaPredicted RBP8.69□□□□□ -1.02
SLIRP-205ENST00000556310 TENM3Q9P273 2699 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 TRAV25A0A0B4J276 109 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 A0A1B0GU03 582 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 C15orf62A8K5M9 175 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 CENPXA8MT69 81 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 K7EMT4 169 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 NDUFB6O95139 128 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 SFT2D2O95562 160 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 OPRK1P41145 380 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 CD81P60033 236 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 TNFRSF9Q07011 255 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 PPP1R1AQ13522 171 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 GUCA2BQ16661 112 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 ANKRD55Q3KP44 614 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 C2orf83Q53S99 150 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 DUSP18Q8NEJ0 188 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 SLC24A4Q8NFF2 622 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 NEURL2Q9BR09 285 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 C20orf24Q9BUV8 137 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 FNDC4Q9H6D8 234 aaPredicted RBP8.68□□□□□ -1.02
SLIRP-205ENST00000556310 C19orf73Q9NVV2 129 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 HSPB7Q9UBY9 170 aa8.68□□□□□ -1.02
SLIRP-205ENST00000556310 IGHV3OR16-8A0A075B7F1 116 aa8.67□□□□□ -1.02
SLIRP-205ENST00000556310 RPS10-NUDT3A0A1W2PQS6 291 aa8.67□□□□□ -1.02
SLIRP-205ENST00000556310 NXPH3O95157 252 aa8.67□□□□□ -1.02
SLIRP-205ENST00000556310 CD7P09564 240 aa8.67□□□□□ -1.02
SLIRP-205ENST00000556310 SLC25A6P12236 298 aa8.67□□□□□ -1.02
SLIRP-205ENST00000556310 NPY1RP25929 384 aa8.67□□□□□ -1.02
SLIRP-205ENST00000556310 BTCP35070 178 aa8.67□□□□□ -1.02
SLIRP-205ENST00000556310 LINC00299Q6ZSB3 139 aa8.67□□□□□ -1.02
SLIRP-205ENST00000556310 SBSPONQ8IVN8 264 aa8.67□□□□□ -1.02
SLIRP-205ENST00000556310 RNASEH2CQ8TDP1 164 aaKnown RBP8.67□□□□□ -1.02
SLIRP-205ENST00000556310 OR10C1Q96KK4 312 aa8.67□□□□□ -1.02
SLIRP-205ENST00000556310 HIPK2Q9H2X6 1198 aa8.67□□□□□ -1.02
SLIRP-205ENST00000556310 U3KQK5 164 aa8.67□□□□□ -1.02
SLIRP-205ENST00000556310 LINC00854A0A1B0GVQ3 168 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 ZNF207O43670 478 aaKnown RBP8.66□□□□□ -1.02
SLIRP-205ENST00000556310 CLN5O75503 358 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 SCGB2A1O75556 95 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 YIF1AO95070 293 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 SCAF4O95104 1147 aaKnown RBP8.66□□□□□ -1.02
SLIRP-205ENST00000556310 ZNF600Q6ZNG1 722 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 RBPMS2Q6ZRY4 209 aaKnown RBP8.66□□□□□ -1.02
SLIRP-205ENST00000556310 SLC16A13Q7RTY0 426 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 NOXA1Q86UR1 476 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 OR4X1Q8NH49 305 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 OR1S1Q8NH92 325 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 DTD1Q8TEA8 209 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 TMEM170AQ8WVE7 144 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 GINS3Q9BRX5 216 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 MRPL36Q9P0J6 103 aaKnown RBP8.66□□□□□ -1.02
SLIRP-205ENST00000556310 TMED3Q9Y3Q3 217 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 SELENOKQ9Y6D0 94 aa8.66□□□□□ -1.02
SLIRP-205ENST00000556310 IGHV7-4-1A0A0J9YVY3 117 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 TSPAN4O14817 238 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 RGS13O14921 159 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 PITX3O75364 302 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 TMEM50AO95807 157 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 SLC25A4P12235 298 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 LAMTOR1Q6IAA8 161 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 OR52B4Q8NGK2 314 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 SPAG8Q99932 426 aaPredicted RBP8.65□□□□□ -1.02
SLIRP-205ENST00000556310 CCDC32Q9BV29 185 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 RBKSQ9H477 322 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 TUBA4BQ9H853 241 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 SMPXQ9UHP9 88 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 U3KQ87 197 aa8.65□□□□□ -1.02
SLIRP-205ENST00000556310 C9orf170A2RU37 121 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 OR11H12B2RN74 326 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 FAM90A26D6RGX4 464 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms