RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TRGV3P03979 118 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 TPPP2P59282 170 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 SRSF2Q01130 221 aaKnown RBP8.62□□□□□ -1.03
TMEM260-208ENST00000555905 FOXE3Q13461 319 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 KLK9Q2XQG4 91 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 SLC16A13Q7RTY0 426 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 COMMD1Q8N668 190 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 LINC01006Q8NI28 216 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 TAF15Q92804 592 aaKnown RBP eCLIP8.62□□□□□ -1.03
TMEM260-208ENST00000555905 BSCL2Q96G97 398 aaPredicted RBP8.62□□□□□ -1.03
TMEM260-208ENST00000555905 ATP5SQ99766 215 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 TMEM147Q9BVK8 224 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 UQCC1Q9NVA1 299 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 KLK9Q9UKQ9 250 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 CUBNO60494 3623 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 NF1P21359 2839 aa8.62□□□□□ -1.03
TMEM260-208ENST00000555905 TEP1Q99973 2627 aaKnown RBP8.61□□□□□ -1.03
TMEM260-208ENST00000555905 BORCS7-ASMTA0A0B4J1R7 106 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 FNDC10F2Z333 226 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 I3L2K1 104 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 NDUFB8O95169 186 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 IFNA5P01569 189 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 ELANEP08246 267 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 AKR1C1Q04828 323 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 ATP5G2Q06055 141 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 ZNF266Q14584 549 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 C15orf32Q32M92 178 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 LAMTOR1Q6IAA8 161 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 KLHDC1Q8N7A1 406 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 VN1R17PQ8TDU5 208 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 ACY3Q96HD9 319 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 USMG5Q96IX5 58 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 CXorf58Q96LI9 332 aa8.61□□□□□ -1.03
TMEM260-208ENST00000555905 FNDC4Q9H6D8 234 aaPredicted RBP8.61□□□□□ -1.03
TMEM260-208ENST00000555905 IGHV3-21A0A0B4J1V1 117 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 A0A0G2JLM5 398 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 UBE2L5PA0A1B0GUS4 154 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 CLPSL1A2RUU4 121 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 K7EIM0 57 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 JTBO76095 146 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 IGHV3-48P01763 117 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 PSMB8P28062 276 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 RAB9AP51151 201 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 MFAP4P55083 255 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 GAMTQ14353 236 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 OPCMLQ14982 345 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 MLANAQ16655 118 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 VWC2Q2TAL6 325 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 ACSM6Q6P461 480 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 OR5AU1Q8NGC0 362 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 OR4X2Q8NGF9 303 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 SCGB1C1Q8TD33 95 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 SCARB1Q8WTV0 552 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 EEF1AKMT3Q96AZ1 226 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 ZNF471Q9BX82 626 aaPredicted RBP8.6□□□□□ -1.03
TMEM260-208ENST00000555905 KLK15Q9H2R5 256 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 WFDC1Q9HC57 220 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 NPVFQ9HCQ7 196 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 C21orf62Q9NYP8 219 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 RNF114Q9Y508 228 aa8.6□□□□□ -1.03
TMEM260-208ENST00000555905 TRBV7-1A0A0A6YYK4 115 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 A0A1B0GUS0 222 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 MFSD2BA6NFX1 497 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 SCGB2A1O75556 95 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 NPBWR1P48145 328 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 RND2P52198 227 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 EIF5AP63241 154 aaKnown RBP8.59□□□□□ -1.03
TMEM260-208ENST00000555905 DEFA5Q01523 94 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 RAB31Q13636 194 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 Q56UQ5 140 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 RPL7L1Q6DKI1 246 aaKnown RBP8.59□□□□□ -1.03
TMEM260-208ENST00000555905 TEPPQ6URK8 271 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 C10orf99Q6UWK7 81 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 RNF152Q8N8N0 203 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 UBAC2Q8NBM4 344 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 TMEM116Q8NCL8 245 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 OR4X1Q8NH49 305 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 NPIPB3Q92617 1050 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 TXN2Q99757 166 aa8.59□□□□□ -1.03
TMEM260-208ENST00000555905 MPDU1O75352 247 aa8.58□□□□□ -1.04
TMEM260-208ENST00000555905 MDKP21741 143 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-208ENST00000555905 FGF7P21781 194 aa8.58□□□□□ -1.04
TMEM260-208ENST00000555905 FOXL1Q12952 345 aa8.58□□□□□ -1.04
TMEM260-208ENST00000555905 BTNL8Q6UX41 500 aa8.58□□□□□ -1.04
TMEM260-208ENST00000555905 LCNL1Q6ZST4 164 aa8.58□□□□□ -1.04
TMEM260-208ENST00000555905 TMEM144Q7Z5S9 345 aa8.58□□□□□ -1.04
TMEM260-208ENST00000555905 SLC51BQ86UW2 128 aa8.58□□□□□ -1.04
TMEM260-208ENST00000555905 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-208ENST00000555905 ZNF502Q8TBZ5 544 aa8.58□□□□□ -1.04
TMEM260-208ENST00000555905 PARD6GQ9BYG4 376 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-208ENST00000555905 WDR61Q9GZS3 305 aaKnown RBP8.58□□□□□ -1.04
TMEM260-208ENST00000555905 CYTL1Q9NRR1 136 aa8.58□□□□□ -1.04
TMEM260-208ENST00000555905 GAR1Q9NY12 217 aaKnown RBP8.58□□□□□ -1.04
TMEM260-208ENST00000555905 S4R3C0 116 aa8.58□□□□□ -1.04
TMEM260-208ENST00000555905 TRAV30A0A087WSZ9 112 aa8.57□□□□□ -1.04
TMEM260-208ENST00000555905 ZFP92A6NM28 416 aa8.57□□□□□ -1.04
TMEM260-208ENST00000555905 GNG7O60262 68 aa8.57□□□□□ -1.04
TMEM260-208ENST00000555905 CLN5O75503 358 aa8.57□□□□□ -1.04
TMEM260-208ENST00000555905 IGHV3-23P01764 117 aa8.57□□□□□ -1.04
TMEM260-208ENST00000555905 RPLP1P05386 114 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms