RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 LINC01548A6NM66 108 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 BOLA2-SMG1P6H3BVE0 249 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 HAX1O00165 279 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 JTBO76095 146 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 IGLV1-40P01703 118 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 PRH1P02810 166 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 MFAP4P55083 255 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 CD300CQ08708 224 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 C19orf54Q5BKX5 351 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 EIF5AL1Q6IS14 154 aaKnown RBP8.77□□□□□ -1.01
SHMT2-220ENST00000555634 Q6ZS46 218 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 ZNF329Q86UD4 541 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 OR5AU1Q8NGC0 362 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 ATP6V0BQ99437 205 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 TXN2Q99757 166 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 SERTAD4Q9NUC0 356 aa8.77□□□□□ -1.01
SHMT2-220ENST00000555634 ZFP92A6NM28 416 aa8.76□□□□□ -1.01
SHMT2-220ENST00000555634 NUDT19A8MXV4 375 aa8.76□□□□□ -1.01
SHMT2-220ENST00000555634 NUPL2O15504 423 aaKnown RBP8.76□□□□□ -1.01
SHMT2-220ENST00000555634 TPT1P13693 172 aaKnown RBP8.76□□□□□ -1.01
SHMT2-220ENST00000555634 PSMB8P28062 276 aa8.76□□□□□ -1.01
SHMT2-220ENST00000555634 PPIFP30405 207 aaKnown RBP8.76□□□□□ -1.01
SHMT2-220ENST00000555634 S100A7P31151 101 aa8.76□□□□□ -1.01
SHMT2-220ENST00000555634 RND2P52198 227 aa8.76□□□□□ -1.01
SHMT2-220ENST00000555634 NHLH2Q02577 135 aa8.76□□□□□ -1.01
SHMT2-220ENST00000555634 CFHR3Q02985 330 aa8.76□□□□□ -1.01
SHMT2-220ENST00000555634 TEPPQ6URK8 271 aa8.76□□□□□ -1.01
SHMT2-220ENST00000555634 TMUB2Q71RG4 321 aa8.76□□□□□ -1.01
SHMT2-220ENST00000555634 OR11H4Q8NGC9 324 aa8.76□□□□□ -1.01
SHMT2-220ENST00000555634 LINC01006Q8NI28 216 aa8.76□□□□□ -1.01
SHMT2-220ENST00000555634 ZNF471Q9BX82 626 aaPredicted RBP8.76□□□□□ -1.01
SHMT2-220ENST00000555634 NPVFQ9HCQ7 196 aa8.76□□□□□ -1.01
SHMT2-220ENST00000555634 TRBV9A0A0B4J1U6 114 aa8.75□□□□□ -1.01
SHMT2-220ENST00000555634 SOX15O60248 233 aa8.75□□□□□ -1.01
SHMT2-220ENST00000555634 FGF7P21781 194 aa8.75□□□□□ -1.01
SHMT2-220ENST00000555634 RAB9AP51151 201 aa8.75□□□□□ -1.01
SHMT2-220ENST00000555634 RELQ04864 619 aaPredicted RBP8.75□□□□□ -1.01
SHMT2-220ENST00000555634 PVRIGQ6DKI7 326 aa8.75□□□□□ -1.01
SHMT2-220ENST00000555634 SPSB3Q6PJ21 355 aa8.75□□□□□ -1.01
SHMT2-220ENST00000555634 S100A7AQ86SG5 101 aa8.75□□□□□ -1.01
SHMT2-220ENST00000555634 C9orf62Q8N4C0 152 aa8.75□□□□□ -1.01
SHMT2-220ENST00000555634 TMEM158Q8WZ71 300 aa8.75□□□□□ -1.01
SHMT2-220ENST00000555634 GNPNAT1Q96EK6 184 aaPredicted RBP8.75□□□□□ -1.01
SHMT2-220ENST00000555634 BSCL2Q96G97 398 aaPredicted RBP8.75□□□□□ -1.01
SHMT2-220ENST00000555634 GNB4Q9HAV0 340 aa8.75□□□□□ -1.01
SHMT2-220ENST00000555634 TCRBV4S1A1TA0A5B7 111 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 I3L2K1 104 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 CXCL2P19875 107 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 MDKP21741 143 aaPredicted RBP8.74□□□□□ -1.01
SHMT2-220ENST00000555634 OR10J1P30954 320 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 NKX2-5P52952 324 aaPredicted RBP8.74□□□□□ -1.01
SHMT2-220ENST00000555634 MFAP2P55001 183 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 SELENOTP62341 195 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 VWC2Q2TAL6 325 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 C19orf35Q6ZS72 473 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 TMEM144Q7Z5S9 345 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 SLC51BQ86UW2 128 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.74□□□□□ -1.01
SHMT2-220ENST00000555634 TMEM116Q8NCL8 245 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 OR4X1Q8NH49 305 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 SCARB1Q8WTV0 552 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 UBE2E2Q96LR5 201 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 FANCD2OSQ96PS1 177 aa8.74□□□□□ -1.01
SHMT2-220ENST00000555634 PARD6GQ9BYG4 376 aaPredicted RBP8.74□□□□□ -1.01
SHMT2-220ENST00000555634 SVEP1Q4LDE5 3571 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 IGHV3-21A0A0B4J1V1 117 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 MFSD2BA6NFX1 497 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 OR2T8A6NH00 312 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 PMS2P5A8MQ11 134 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 PRSS46E5RG02 174 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 K7EIM0 57 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 CLN5O75503 358 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 NDUFB8O95169 186 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 CFDP00746 253 aaPredicted RBP8.73□□□□□ -1.01
SHMT2-220ENST00000555634 FCGR2BP31994 310 aaPredicted RBP8.73□□□□□ -1.01
SHMT2-220ENST00000555634 GPR183P32249 361 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 ARL3P36405 182 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 GAMTQ14353 236 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 OPCMLQ14982 345 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 KLK9Q2XQG4 91 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 BTNL8Q6UX41 500 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 RNF152Q8N8N0 203 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 TMEM170AQ8WVE7 144 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 C4orf3Q8WVX3 66 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 WFDC12Q8WWY7 111 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 PFDN2Q9UHV9 154 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 KLK9Q9UKQ9 250 aa8.73□□□□□ -1.01
SHMT2-220ENST00000555634 TSSC4Q9Y5U2 329 aaPredicted RBP8.73□□□□□ -1.01
SHMT2-220ENST00000555634 RPLP1P05386 114 aaKnown RBP8.72□□□□□ -1.01
SHMT2-220ENST00000555634 LGALS1P09382 135 aaKnown RBP8.72□□□□□ -1.01
SHMT2-220ENST00000555634 CAMLGP49069 296 aa8.72□□□□□ -1.01
SHMT2-220ENST00000555634 PROK1P58294 105 aa8.72□□□□□ -1.01
SHMT2-220ENST00000555634 SRSF2Q01130 221 aaKnown RBP8.72□□□□□ -1.01
SHMT2-220ENST00000555634 DEFA5Q01523 94 aa8.72□□□□□ -1.01
SHMT2-220ENST00000555634 LGALSLQ3ZCW2 172 aaPredicted RBP8.72□□□□□ -1.01
SHMT2-220ENST00000555634 TREML4Q6UXN2 200 aa8.72□□□□□ -1.01
SHMT2-220ENST00000555634 HAPLN4Q86UW8 402 aa8.72□□□□□ -1.01
SHMT2-220ENST00000555634 KLHL30-AS1Q8NEE0 82 aa8.72□□□□□ -1.01
SHMT2-220ENST00000555634 BPIFCQ8NFQ6 507 aa8.72□□□□□ -1.01
SHMT2-220ENST00000555634 ZNF502Q8TBZ5 544 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms