RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 FXYD4P59646 89 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 GNG2P59768 71 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 SNRPD3P62318 126 aaKnown RBP6.74□□□□□ -1.33
SCFD1-215ENST00000555259 TPRA1Q86W33 373 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 C8orf59Q8N0T1 100 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-215ENST00000555259 DHRSXQ8N5I4 330 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 FCAMRQ8WWV6 532 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 NARS2Q96I59 477 aaKnown RBP6.74□□□□□ -1.33
SCFD1-215ENST00000555259 S100A14Q9HCY8 104 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 HLA-DRB4X5D2U9 266 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 LOC102723971A0A1B0GUV8 181 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 RPS10-NUDT3A0A1W2PQS6 291 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 FAM90A26D6RGX4 464 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 NUDT3O95989 172 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 HSMCR30P0CW71 290 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 GNRHRP30968 328 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 FXYD7P58549 80 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 TMEM17Q86X19 198 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 PDCD5O14737 125 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 IGKV3-20P01619 116 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 HBE1P02100 147 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 RLN1P04808 185 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 LPAR6P43657 344 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 ALDH3B2P48448 385 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 AP2S1P53680 142 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-215ENST00000555259 DLK1P80370 383 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 TTC32Q5I0X7 151 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 GDF5OSQ5U4N7 250 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 C10orf67Q8IYJ2 551 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 BEST4Q8NFU0 473 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 GLMPQ8WWB7 406 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 TSC22D3Q99576 134 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 CCDC90BQ9GZT6 254 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 Q9H8V8 135 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 SEPSECSQ9HD40 501 aaKnown RBP6.73□□□□□ -1.33
SCFD1-215ENST00000555259 PTTG2Q9NZH5 202 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 MDFICQ9P1T7 246 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 U3KQE9 123 aa6.73□□□□□ -1.33
SCFD1-215ENST00000555259 TRAV1-2A0A0B4J238 106 aa6.72□□□□□ -1.33
SCFD1-215ENST00000555259 PTGES3LE9PB15 166 aa6.72□□□□□ -1.33
SCFD1-215ENST00000555259 FUSP35637 526 aaKnown RBP eCLIP6.72□□□□□ -1.33
SCFD1-215ENST00000555259 HOXA1P49639 335 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-215ENST00000555259 PRCDQ00LT1 54 aa6.72□□□□□ -1.33
SCFD1-215ENST00000555259 SSX7Q7RTT5 188 aa6.72□□□□□ -1.33
SCFD1-215ENST00000555259 ZNF709Q8N972 641 aa6.72□□□□□ -1.33
SCFD1-215ENST00000555259 TSPAN14Q8NG11 270 aa6.72□□□□□ -1.33
SCFD1-215ENST00000555259 Q9H3A6 140 aa6.72□□□□□ -1.33
SCFD1-215ENST00000555259 ACOT13Q9NPJ3 140 aa6.72□□□□□ -1.33
SCFD1-215ENST00000555259 CASQ2O14958 399 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-215ENST00000555259 PGLYRP1O75594 196 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-215ENST00000555259 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-215ENST00000555259 NKX2-1P43699 371 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-215ENST00000555259 DEFB1P60022 68 aa6.71□□□□□ -1.34
SCFD1-215ENST00000555259 ERHP84090 104 aaKnown RBP6.71□□□□□ -1.34
SCFD1-215ENST00000555259 RRN3P1Q2M238 152 aa6.71□□□□□ -1.34
SCFD1-215ENST00000555259 C16orf54Q6UWD8 224 aa6.71□□□□□ -1.34
SCFD1-215ENST00000555259 C1orf158Q8N1D5 194 aa6.71□□□□□ -1.34
SCFD1-215ENST00000555259 TMEM230Q96A57 120 aa6.71□□□□□ -1.34
SCFD1-215ENST00000555259 NRN1Q9NPD7 142 aa6.71□□□□□ -1.34
SCFD1-215ENST00000555259 PGPEP1Q9NXJ5 209 aa6.71□□□□□ -1.34
SCFD1-215ENST00000555259 MRPL36Q9P0J6 103 aaKnown RBP6.71□□□□□ -1.34
SCFD1-215ENST00000555259 GOLT1BQ9Y3E0 138 aa6.71□□□□□ -1.34
SCFD1-215ENST00000555259 CLN5O75503 358 aa6.7□□□□□ -1.34
SCFD1-215ENST00000555259 RAB3BP20337 219 aa6.7□□□□□ -1.34
SCFD1-215ENST00000555259 MLLT11Q13015 90 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-215ENST00000555259 USF2Q15853 346 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-215ENST00000555259 HOGA1Q86XE5 327 aa6.7□□□□□ -1.34
SCFD1-215ENST00000555259 LGALS14Q8TCE9 139 aa6.7□□□□□ -1.34
SCFD1-215ENST00000555259 BORCS5Q969J3 196 aa6.7□□□□□ -1.34
SCFD1-215ENST00000555259 C17orf77Q96MU5 243 aa6.7□□□□□ -1.34
SCFD1-215ENST00000555259 C7orf50Q9BRJ6 194 aaKnown RBP6.7□□□□□ -1.34
SCFD1-215ENST00000555259 F5H768 121 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 SCGNO76038 276 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 IGKV1-17P01599 117 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 FCER2P06734 321 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 MYL9P24844 172 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 HERV-K104P61576 105 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 HSPE1P61604 102 aaKnown RBP6.69□□□□□ -1.34
SCFD1-215ENST00000555259 CLINT1Q14677 625 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 PACRGLQ8N7B6 248 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 OR4A16Q8NH70 328 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 RNF141Q8WVD5 230 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 CLUHP3Q96NS8 147 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 SLC35B3Q9H1N7 401 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 SAV1Q9H4B6 383 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-215ENST00000555259 A0A1W2PPQ1 181 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 SMIM30A4D0T7 59 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 FAM229AH3BQW9 127 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 CORTO00230 105 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 SCGB2A1O75556 95 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 HNRNPCP07910 306 aaKnown RBP eCLIP6.69□□□□□ -1.342e-8■□□□□ 9.8
SCFD1-215ENST00000555259 DEFB130BP0DP73 79 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 DEFB130AP0DP74 79 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 SNCAP37840 140 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 TIGITQ495A1 244 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 SPINK9Q5DT21 86 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 CDPF1Q6NVV7 123 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 Q6ZSN1 163 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 OR4B1Q8NGF8 309 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 OR4X1Q8NH49 305 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms