RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 SMCR5Q8TEV8 140 aa2.65□□□□□ -1.99
PSEN1-211ENST00000554995 FGF13Q92913 245 aa2.65□□□□□ -1.99
PSEN1-211ENST00000554995 C20orf166-AS1Q96NR2 134 aa2.65□□□□□ -1.99
PSEN1-211ENST00000554995 NCOR1O75376 2440 aa2.65□□□□□ -1.99
PSEN1-211ENST00000554995 MYH10P35580 1976 aa2.65□□□□□ -1.99
PSEN1-211ENST00000554995 DOCK1Q14185 1865 aa2.65□□□□□ -1.99
PSEN1-211ENST00000554995 CHD6Q8TD26 2715 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 DSCAML1Q8TD84 2053 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 ZDBF2Q9HCK1 2354 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 ANKRD11Q6UB99 2663 aaPredicted RBP2.64□□□□□ -1.99
PSEN1-211ENST00000554995 USP34Q70CQ2 3546 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 MYH9P35579 1960 aaKnown RBP2.64□□□□□ -1.99
PSEN1-211ENST00000554995 SHROOM3Q8TF72 1996 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 TMEM235A6NFC5 223 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 C11orf86A6NJI1 115 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 FADS1O60427 444 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 KCNE1P15382 129 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 HSD11B1P28845 292 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 GABRA4P48169 554 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 GZMMP51124 257 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 TAS2R20P59543 309 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 PSME3P61289 254 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 RPL30P62888 115 aaKnown RBP2.64□□□□□ -1.99
PSEN1-211ENST00000554995 BASP1P80723 227 aaKnown RBP2.64□□□□□ -1.99
PSEN1-211ENST00000554995 MRPS25P82663 173 aaKnown RBP2.64□□□□□ -1.99
PSEN1-211ENST00000554995 AKIRIN2Q53H80 203 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 FKBP1CQ5VVH2 108 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 TCF24Q7RTU0 167 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 OR5B17Q8NGF7 314 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 ROPN1LQ96C74 230 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 DCUN1D1Q96GG9 259 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 PAIP2Q9BPZ3 127 aaKnown RBP2.64□□□□□ -1.99
PSEN1-211ENST00000554995 CACNA1DQ01668 2161 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 PTPRFP10586 1907 aa2.64□□□□□ -1.99
PSEN1-211ENST00000554995 SPTBN4Q9H254 2564 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 EPG5Q9HCE0 2579 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 DNAH12Q6ZR08 3092 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 C5orf42Q9H799 3197 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 A0A087WUJ7 227 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 A0A1W2PQD3 144 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 TXNDC9O14530 226 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 NPYP01303 97 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 HIST1H1TP22492 207 aaPredicted RBP2.63□□□□□ -1.99
PSEN1-211ENST00000554995 BLVRBP30043 206 aaPredicted RBP2.63□□□□□ -1.99
PSEN1-211ENST00000554995 GUK1Q16774 197 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 SMARCD3Q6STE5 483 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 CDC26Q8NHZ8 85 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 DGCR14Q96DF8 476 aaKnown RBP2.63□□□□□ -1.99
PSEN1-211ENST00000554995 TUBA4BQ9H853 241 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 GLTPQ9NZD2 209 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 CFAP47Q6ZTR5 3102 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 PHIPQ8WWQ0 1821 aa2.63□□□□□ -1.99
PSEN1-211ENST00000554995 CHD5Q8TDI0 1954 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 OTOFQ9HC10 1997 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 ZNF292O60281 2723 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 TMEM269A0A1B0GVZ9 245 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 PQLC2LA1A4F0 135 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 KNCNA6PVL3 124 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 GNRH2O43555 120 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 GZMHP20718 246 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 CD24P25063 80 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 RAB13P51153 203 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 FXYD7P58549 80 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 POLR2GP62487 172 aaKnown RBP eCLIP2.62□□□□□ -1.99
PSEN1-211ENST00000554995 EDDM3AQ14507 147 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 SPA17Q15506 151 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 SSX8Q7RTT4 187 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 C20orf196Q8IYI0 205 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 TBC1D19Q8N5T2 526 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 ZNF675Q8TD23 568 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 ZNF471Q9BX82 626 aaPredicted RBP2.62□□□□□ -1.99
PSEN1-211ENST00000554995 MRPL27Q9P0M9 148 aaKnown RBP2.62□□□□□ -1.99
PSEN1-211ENST00000554995 FBXO5Q9UKT4 447 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 PYCARDQ9ULZ3 195 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 CCL26Q9Y258 94 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 FAM215AQ9Y5M1 114 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 COL11A1P12107 1806 aaPredicted RBP2.62□□□□□ -1.99
PSEN1-211ENST00000554995 SIP14410 1827 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 WDFY4Q6ZS81 3184 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 DOCK5Q9H7D0 1870 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 A0A0G2JMZ2 1700 aa2.62□□□□□ -1.99
PSEN1-211ENST00000554995 UQCRHLA0A096LP55 91 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 PVALEFA0A1B0GWK0 134 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 I3L521 148 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 ZNF189O75820 626 aaPredicted RBP2.61□□□□□ -1.99
PSEN1-211ENST00000554995 NSA2O95478 260 aaKnown RBP2.61□□□□□ -1.99
PSEN1-211ENST00000554995 UQCRHP07919 91 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 SRP19P09132 144 aaKnown RBP2.61□□□□□ -1.99
PSEN1-211ENST00000554995 ZNF728P0DKX0 622 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 CAPZBP47756 277 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 GLT8D1Q68CQ7 371 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 LPCAT3Q6P1A2 487 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 ERMAPQ96PL5 475 aaPredicted RBP2.61□□□□□ -1.99
PSEN1-211ENST00000554995 CCDC94Q9BW85 323 aaPredicted RBP2.61□□□□□ -1.99
PSEN1-211ENST00000554995 ULBP3Q9BZM4 244 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 TLNRD1Q9H1K6 362 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 DCSTAMPQ9H295 470 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 PAQR5Q9NXK6 330 aaPredicted RBP2.61□□□□□ -1.99
PSEN1-211ENST00000554995 PSORS1C2Q9UIG4 136 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 PRELID3BQ9Y3B1 194 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms