RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 MANBALQ9NQG1 85 aa2.8□□□□□ -1.96
SYNE2-212ENST00000554584 IGHV4OR15-8A0A075B7B6 117 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 A0A087WW49 117 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 C3orf85A0A1B0GTC6 90 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 PINLYPA6NC86 204 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 RPL18AQ02543 176 aaKnown RBP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 KLF9Q13886 244 aaPredicted RBP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 KISS1Q15726 138 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 RIMKLAQ8IXN7 391 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 HMGCLL1Q8TB92 370 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 SLIRPQ9GZT3 109 aaKnown RBP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 DKK4Q9UBT3 224 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 TMEFF2Q9UIK5 374 aaPredicted RBP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 LRP5O75197 1615 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 IGHV4-38-2P0DP08 117 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 CCR5P51681 352 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 RPS11P62280 158 aaKnown RBP eCLIP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 MRPL16Q9NX20 251 aaKnown RBP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 H3BUX3 64 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 MPV17P39210 176 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 ORMDL2Q53FV1 153 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 SPINK6Q6UWN8 80 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 PPP1R32Q7Z5V6 425 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 RPS4Y2Q8TD47 263 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 XCL2Q9UBD3 114 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 SPTY2D1-AS1A0A0U1RR47 76 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 LMO7DNF2Z398 122 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 IFITM3Q01628 133 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 NDUFS6O75380 124 aaKnown RBP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 DSCR4P56555 118 aaPredicted RBP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 FOXF2Q12947 444 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 PRSS53Q2L4Q9 553 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 FCN3O75636 299 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 ZNRD1Q9P1U0 126 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 NPIPB11E5RHQ5 1161 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 BSPH1Q075Z2 132 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 LYZL2Q7Z4W2 148 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 SMIM4Q8WVI0 70 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 CBLN4Q9NTU7 201 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 PCMT1P22061 227 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 KIR2DS2P43631 304 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 COL4A1P02462 1669 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 RREB1Q92766 1687 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 SFT2D2O95562 160 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 DDTP30046 118 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 OR11H7Q8NGC8 314 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 SRXN1Q9BYN0 137 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 NPIPB8E9PQR5 432 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 SLC25A20O43772 301 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 FAM231DQ6ZW35 169 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 REC114Q7Z4M0 266 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 SLC25A43Q8WUT9 341 aaPredicted RBP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 ZNF503Q96F45 646 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 FANCD2OSQ96PS1 177 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 CEACAM18A8MTB9 384 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 ATP5IP56385 69 aaPredicted RBP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 TMEM136Q6ZRR5 245 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 X6R8D5 127 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 CCL1P22362 96 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 HAMPP81172 84 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 CMC2Q9NRP2 79 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 IGKV2-24A0A0C4DH68 120 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 IGHV1-69-2A0A0G2JMI3 117 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 NDUFB6O95139 128 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 PSG4Q00888 419 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 IL24Q13007 206 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 A0A1W2PPI3 338 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 PGPEP1LA6NFU8 196 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 TRDCB7Z8K6 153 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 PAX8Q06710 450 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 LINC01555Q8NAE3 123 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 GLI3P10071 1580 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 TGIF2-C20orf24A0A0A6YYL0 155 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 LINC00862A6NCI5 91 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 SERF1AO75920 110 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 TRGC2P03986 189 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 PPICP45877 212 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 GAGE2AQ6NT46 116 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 COL16A1Q07092 1604 aaPredicted RBP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 TRAV8-4A0A0B4J246 113 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 TMEM50BP56557 158 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 LYZL4Q96KX0 146 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 MRPL18Q9H0U6 180 aaKnown RBP2.79□□□□□ -1.96
SYNE2-212ENST00000554584 PARP14Q460N5 1801 aa2.79□□□□□ -1.96
SYNE2-212ENST00000554584 RBMY1BA6NDE4 496 aaKnown RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 RBMY1EA6NEQ0 496 aaKnown RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 PDCD6O75340 191 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 RBMY1DP0C7P1 496 aaKnown RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 RBMY1A1P0DJD3 496 aaKnown RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 RBMY1CP0DJD4 496 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 CFHR1Q03591 330 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 OR11H4Q8NGC9 324 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 ABHD1Q96SE0 405 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 JMJD1CQ15652 2540 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 DCAF10Q5QP82 559 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 RASL10BQ96S79 203 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 RNF122Q9H9V4 155 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 A6NNC1 897 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 DKK1O94907 266 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms