RNA–Protein interactions for RNA: ENST00000554042.1

AL450442.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL450442.1, Length 854 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL450442.1-201ENST00000554042 ZNF728P0DKX0 622 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 SMIM17P0DL12 118 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 SCGB1A1P11684 91 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 CCL5P13501 91 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 PSMB8P28062 276 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 CASP1P29466 404 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 EMP1P54849 157 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 CDC42P60953 191 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 GNG5P63218 68 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 LYRM7Q5U5X0 104 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 LCA10Q71F78 164 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 NUP35Q8NFH5 326 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 SKA2Q8WVK7 121 aaPredicted RBP1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 PBDC1Q9BVG4 233 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 ZNF471Q9BX82 626 aaPredicted RBP1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 OR8D2Q9GZM6 311 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 MAP1LC3BQ9GZQ8 125 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 C8orf4Q9NR00 106 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 TMEM106BQ9NUM4 274 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 MED29Q9NX70 200 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 TAS2R7Q9NYW3 318 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 CAMSAP2Q08AD1 1489 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 ARAP1Q96P48 1450 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 SLX4Q8IY92 1834 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 GBF1Q92538 1859 aa1.28□□□□□ -2.2
AL450442.1-201ENST00000554042 SCN10AQ9Y5Y9 1956 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 ECM29Q5VYK3 1845 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 A0A1W2PQD3 144 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 A0A1W2PRE2 83 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 FUOMA2VDF0 154 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 E7EQ34 232 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 CSN2P05814 226 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 TFPTP0C1Z6 253 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 NFYAP23511 347 aaPredicted RBP1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 HLA-DMBP28068 263 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 ZNF80P51504 273 aaPredicted RBP1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 TPI1P60174 286 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 YPEL3P61236 119 aaPredicted RBP1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 S100A12P80511 92 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 RHEBQ15382 184 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 DCUN1D2Q6PH85 259 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 TRAPPC6BQ86SZ2 158 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 LHFPL1Q86WI0 220 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 C12orf29Q8N999 325 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 TERB2Q8NHR7 220 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 RNASE11Q8TAA1 199 aaKnown RBP1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 DNAJC30Q96LL9 226 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 LRTM1Q9HBL6 345 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 BATF3Q9NR55 127 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 SPANXA1Q9NS26 97 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 SLC39A9Q9NUM3 307 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 GINS2Q9Y248 185 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 ERGIC3Q9Y282 383 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 AMMECR1Q9Y4X0 333 aaPredicted RBP1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 HSPB11Q9Y547 144 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 RBM7Q9Y580 266 aaKnown RBP1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 DENND4CQ5VZ89 1909 aa1.27□□□□□ -2.21
AL450442.1-201ENST00000554042 CEP152O94986 1710 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 KDM5BQ9UGL1 1544 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 MED13Q9UHV7 2174 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 MDFIC2A0A1B0GVS7 189 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 DUXBA0A1W2PPF3 345 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 MEIS3P1A6NDR6 274 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 TMEM212A6NML5 194 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 RIIAD1A6NNX1 92 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 CLDN25C9JDP6 229 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 TRAPPC2LH3BP13 241 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 GNRH2O43555 120 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 CREBL2O60519 120 aaPredicted RBP1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 IFNA14P01570 189 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 S100A4P26447 101 aaKnown RBP1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 S100GP29377 79 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 SRIP30626 198 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 GLRXP35754 106 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 DEFA3P59666 94 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 RRN3P1Q2M238 152 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 LINC01554Q52M75 96 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 PABPC1L2AQ5JQF8 200 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 LYZL1Q6UWQ5 148 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 ZNF705AQ6ZN79 300 aaPredicted RBP1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 MIR17HGQ75NE6 70 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 CLVS1Q8IUQ0 354 aaPredicted RBP1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 FAM24BQ8N5W8 94 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 TMEM35BQ8NCS4 154 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 OR4C16Q8NGL9 310 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 OR13D1Q8NGV5 346 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 FGF13Q92913 245 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 SCGB3A1Q96QR1 104 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 AIF1LQ9BQI0 150 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 RTL8AQ9BWD3 113 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 TTTY12Q9BZ98 90 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 TMEM133Q9H2Q1 129 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 LAMTOR3Q9UHA4 124 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 PSORS1C2Q9UIG4 136 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 TIMM22Q9Y584 194 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 PLXND1Q9Y4D7 1925 aa1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 ZNF106Q9H2Y7 1883 aaKnown RBP1.26□□□□□ -2.21
AL450442.1-201ENST00000554042 SDK1Q7Z5N4 2213 aa1.25□□□□□ -2.21
AL450442.1-201ENST00000554042 MED1Q15648 1581 aaPredicted RBP1.25□□□□□ -2.21
AL450442.1-201ENST00000554042 SLIT2O94813 1529 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms