RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ERHP84090 104 aaKnown RBP8.88□□□□□ -0.99
CKAP4-202ENST00000552828 PPP1R1AQ13522 171 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 SLC25A24Q6NUK1 477 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 Q6ZRM9 215 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 SLC35G3Q8N808 338 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 OR1L6Q8NGR2 347 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 DYNLRB2Q8TF09 96 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 GPR146Q96CH1 333 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 WDR89Q96FK6 387 aaPredicted RBP8.88□□□□□ -0.99
CKAP4-202ENST00000552828 CACNG5Q9UF02 275 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 CACFD1Q9UGQ2 172 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 SHPKQ9UHJ6 478 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 FLVCR2Q9UPI3 526 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 DUXBA0A1W2PPF3 345 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 PPP5D1E7EU14 171 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 OR2C1O95371 312 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 SULT1A3P0DMM9 295 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 SULT1A4P0DMN0 295 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 EDN2P20800 178 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 CBLN1P23435 193 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 GUCA2BQ16661 112 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 SLC16A13Q7RTY0 426 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 LYZL2Q7Z4W2 148 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 SLC7A5P1Q8MH63 180 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 OR2C3Q8N628 320 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 LRTM2Q8N967 370 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 OR52E5Q8NH55 327 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 EEF1AKMT3Q96AZ1 226 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 CXorf58Q96LI9 332 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 ENY2Q9NPA8 101 aa8.87□□□□□ -0.99
CKAP4-202ENST00000552828 F11RQ9Y624 299 aaKnown RBP8.87□□□□□ -0.99
CKAP4-202ENST00000552828 C9orf170A2RU37 121 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 A8MWP6 167 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 INS-IGF2F8WCM5 200 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 HLA-AP01891 365 aaKnown RBP8.86□□□□□ -0.99
CKAP4-202ENST00000552828 TCRBP04435 133 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 SNCAP37840 140 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 SPCS3P61009 180 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 ANKRD55Q3KP44 614 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 AARDQ4LEZ3 155 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 C4orf46Q504U0 113 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 SPINK9Q5DT21 86 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 ZNF767PQ75MW2 155 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 OR1P1Q8NH06 330 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 LINC00476Q8WZB0 136 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 HYLS1Q96M11 299 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 OVOL2Q9BRP0 275 aa8.86□□□□□ -0.99
CKAP4-202ENST00000552828 TRBV7-1A0A0A6YYK4 115 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 A0A1B0GU03 582 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 TMEM213A2RRL7 107 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 PRAF2O60831 178 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 OR4E1P0C645 316 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 ANXA7P20073 488 aaKnown RBP8.85□□□□□ -0.99
CKAP4-202ENST00000552828 HOXA1P49639 335 aaPredicted RBP8.85□□□□□ -0.99
CKAP4-202ENST00000552828 SUB1P53999 127 aaKnown RBP eCLIP8.85□□□□□ -0.99
CKAP4-202ENST00000552828 DHRS2Q13268 280 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 SMCO1Q147U7 214 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 NMSQ5H8A3 153 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 TMEM61Q8N0U2 210 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 ZNF114Q8NC26 417 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 COQ8AQ8NI60 647 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 VN1R17PQ8TDU5 208 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 CCDC140Q96MF4 163 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 GGTLC1Q9BX51 225 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 C20orf85Q9H1P6 137 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 MED28Q9H204 178 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 MLXQ9UH92 298 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 TMED3Q9Y3Q3 217 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 DNAH10Q8IVF4 4471 aa8.85□□□□□ -0.99
CKAP4-202ENST00000552828 TRAV6A0A075B6T7 132 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 MFSD2BA6NFX1 497 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 CEBPZOSA8MTT3 80 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 IGHV3-23P01764 117 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 C8orf88P0DMB2 117 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 ARL3P36405 182 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 MFAP2P55001 183 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 FAM106AQ4KMX7 169 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 CLEC19AQ6UXS0 136 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 LYG2Q86SG7 212 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 WFDC3Q8IUB2 231 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 OR1S1Q8NH92 325 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 CACNG8Q8WXS5 425 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 HEYLQ9NQ87 328 aaPredicted RBP8.84□□□□□ -0.99
CKAP4-202ENST00000552828 NUDT15Q9NV35 164 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 S4R3C0 116 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 HERC2O95714 4834 aa8.84□□□□□ -0.99
CKAP4-202ENST00000552828 LOC102724200A0A096LPH7 203 aaPredicted RBP8.83□□□□□ -1
CKAP4-202ENST00000552828 TRAV25A0A0B4J276 109 aa8.83□□□□□ -1
CKAP4-202ENST00000552828 CLEC3BP05452 202 aa8.83□□□□□ -1
CKAP4-202ENST00000552828 HOXB5P09067 269 aa8.83□□□□□ -1
CKAP4-202ENST00000552828 H2AFB2P0C5Z0 115 aa8.83□□□□□ -1
CKAP4-202ENST00000552828 SLC25A6P12236 298 aa8.83□□□□□ -1
CKAP4-202ENST00000552828 Q5BKY6 102 aa8.83□□□□□ -1
CKAP4-202ENST00000552828 UXS1Q8NBZ7 420 aa8.83□□□□□ -1
CKAP4-202ENST00000552828 OR52B4Q8NGK2 314 aa8.83□□□□□ -1
CKAP4-202ENST00000552828 ZNF502Q8TBZ5 544 aa8.83□□□□□ -1
CKAP4-202ENST00000552828 SCARB1Q8WTV0 552 aa8.83□□□□□ -1
CKAP4-202ENST00000552828 MISP3Q96FF7 219 aa8.83□□□□□ -1
CKAP4-202ENST00000552828 C21orf62Q9NYP8 219 aa8.83□□□□□ -1
CKAP4-202ENST00000552828 TP53TG1Q9Y2A0 90 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms