RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 CTXN2P0C2S0 81 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 NKX2-1P43699 371 aaPredicted RBP6.49□□□□□ -1.37
YBX3-211ENST00000541351 NEDD8Q15843 81 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 H1FOOQ8IZA3 346 aaPredicted RBP6.49□□□□□ -1.37
YBX3-211ENST00000541351 ZNF114Q8NC26 417 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 DMBX1Q8NFW5 382 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 OR10W1Q8NGF6 305 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 CYGBQ8WWM9 190 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 CYYR1Q96J86 154 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 NAA50Q9GZZ1 169 aaKnown RBP6.49□□□□□ -1.37
YBX3-211ENST00000541351 GABARAPL1Q9H0R8 117 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 SPATA2Q9UM82 520 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 ORC6Q9Y5N6 252 aa6.49□□□□□ -1.37
YBX3-211ENST00000541351 A0A0U1RQV1 116 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 H3BNG1 76 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 OGG1O15527 345 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 RBFOX2O43251 390 aaKnown RBP eCLIP6.48□□□□□ -1.37
YBX3-211ENST00000541351 CRYBB3P26998 211 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 TSPOP30536 169 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 RCVRNP35243 200 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 ERVK-16P61578 105 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 WT1-ASQ06250 92 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 CD300CQ08708 224 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 P2RY14Q15391 338 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 ACSM3Q53FZ2 586 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 XAF1Q6GPH4 301 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 OR56B1Q8NGI3 324 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 HINT2Q9BX68 163 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 SCPEP1Q9HB40 452 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 FKBP14Q9NWM8 211 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 BABAM2Q9NXR7 383 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 FKBP11Q9NYL4 201 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 OR2W1Q9Y3N9 320 aa6.48□□□□□ -1.37
YBX3-211ENST00000541351 A0A1W2PPK0 400 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 TMEM14DPA8MWL7 114 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 FAM90A26D6RGX4 464 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 SOCS1O15524 211 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 UPK1BO75841 260 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 HPRT1P00492 218 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 GNAO1P09471 354 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 DEFA1P59665 94 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 DEFA3P59666 94 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 RPL30P62888 115 aaKnown RBP6.47□□□□□ -1.37
YBX3-211ENST00000541351 CATR1Q13166 79 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 OR5I1Q13606 314 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 POU2AF1Q16633 256 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 ESRGQ1W209 222 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 FOXI2Q6ZQN5 318 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 TPRA1Q86W33 373 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 SPARTQ8N0X7 666 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 FAM89BQ8N5H3 189 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 RHOXF1Q8NHV9 184 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 FCGR1BQ92637 280 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 MISP3Q96FF7 219 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 ARHGAP5-AS1Q96IT6 56 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 UHRF2Q96PU4 802 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 ABHD1Q96SE0 405 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 PECRQ9BY49 303 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 LPAR5Q9H1C0 372 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 DCSTAMPQ9H295 470 aa6.47□□□□□ -1.37
YBX3-211ENST00000541351 TRAV26-1A0A087WT03 109 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 PSCAO43653 123 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 APOA1P02647 267 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 FCGR3AP08637 254 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 MYL12AP19105 171 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 TALDO1P37837 337 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 ID1P41134 155 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 PSG9Q00887 426 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 UNC119Q13432 240 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 RAB11BQ15907 218 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 CTF1Q16619 201 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 C1orf100Q5SVJ3 147 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 SLC51BQ86UW2 128 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 CCDC28AQ8IWP9 274 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 C8orf59Q8N0T1 100 aaPredicted RBP6.46□□□□□ -1.38
YBX3-211ENST00000541351 BPIFB6Q8NFQ5 453 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 OR4B1Q8NGF8 309 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 DERL3Q96Q80 235 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 FUNDC2Q9BWH2 189 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 ZFAND3Q9H8U3 227 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 NRN1Q9NPD7 142 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 TMEM140Q9NV12 185 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 TAS2R8Q9NYW2 309 aa6.46□□□□□ -1.38
YBX3-211ENST00000541351 TEX50A0A1B0GTY4 177 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 IRGMA1A4Y4 181 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 CENPXA8MT69 81 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 I3L2K1 104 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 EI24O14681 340 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 GSTZ1O43708 216 aaPredicted RBP6.45□□□□□ -1.38
YBX3-211ENST00000541351 CCNKO75909 580 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 SNAPC5O75971 98 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 MT-CO2P00403 227 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 IGKV3-20P01619 116 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 HLA-DQB1P01920 261 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 GADD45AP24522 165 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 S100A5P33763 92 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 POLR2IP36954 125 aaKnown RBP6.45□□□□□ -1.38
YBX3-211ENST00000541351 FXYD7P58549 80 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 IFITM3Q01628 133 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 ACOT6Q3I5F7 207 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms