RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 OR56B1Q8NGI3 324 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 TCTEX1D2Q8WW35 142 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 PHYHIPQ92561 330 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 C17orf77Q96MU5 243 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 RAB40CQ96S21 281 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 TXN2Q99757 166 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 COMMD5Q9GZQ3 224 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 NXF2Q9GZY0 626 aaKnown RBP3.21□□□□□ -1.9
SNHG1-214ENST00000540865 KCNK15Q9H427 330 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 TMEM231Q9H6L2 316 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 MDFICQ9P1T7 246 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 XCL2Q9UBD3 114 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 RABAC1Q9UI14 185 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 DIMT1Q9UNQ2 313 aaKnown RBP3.21□□□□□ -1.9
SNHG1-214ENST00000540865 AP4S1Q9Y587 144 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 F11RQ9Y624 299 aaKnown RBP3.21□□□□□ -1.9
SNHG1-214ENST00000540865 FAT4Q6V0I7 4981 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 A0A1W2PPQ1 181 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 A0A1W2PS18 150 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 UPK2O00526 184 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 GYG2O15488 501 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 RBFOX2O43251 390 aaKnown RBP eCLIP3.2□□□□□ -1.9
SNHG1-214ENST00000540865 APOHP02749 345 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-214ENST00000540865 SMR3BP02814 79 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-214ENST00000540865 IGKV2-30P06310 120 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 ZNF688P0C7X2 276 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 TRAPPC2P0DI81 140 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 TRAPPC2BP0DI82 140 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 MYL12AP19105 171 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 TAS2R31P59538 309 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 WT1-ASQ06250 92 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 EIF4EBP1Q13541 118 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-214ENST00000540865 RCN1Q15293 331 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 BAK1Q16611 211 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 POU2AF1Q16633 256 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 KCTD21Q4G0X4 260 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 RBM48Q5RL73 367 aaKnown RBP3.2□□□□□ -1.9
SNHG1-214ENST00000540865 TOMM20LQ6UXN7 152 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 GSG1LQ6UXU4 331 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 CBR4Q8N4T8 237 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 OR10W1Q8NGF6 305 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 MPLKIPQ8TAP9 179 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 LSM10Q969L4 123 aaKnown RBP3.2□□□□□ -1.9
SNHG1-214ENST00000540865 DCSTAMPQ9H295 470 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 Q9H3A6 140 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 Q9H8V8 135 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 HRASLSQ9HDD0 168 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 MED4Q9NPJ6 270 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 ZNF446Q9NWS9 450 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 CLEC2DQ9UHP7 191 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 OR2W1Q9Y3N9 320 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 LINC00588Q9Y4M8 146 aa3.2□□□□□ -1.9
SNHG1-214ENST00000540865 TRAV3A0A0B4J244 114 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 IGHV3-66A0A0C4DH42 116 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 TEX50A0A1B0GTY4 177 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 PNMA8CA0A1B0GUJ8 204 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 RPS10-NUDT3A0A1W2PQS6 291 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 H3BMM0 161 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 J3QRK9 145 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 EI24O14681 340 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 IFNA5P01569 189 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 CTXN2P0C2S0 81 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 NQO2P16083 231 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 RANBP1P43487 201 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 HOXA1P49639 335 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-214ENST00000540865 DAD1P61803 113 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 MSMO1Q15800 293 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 USF2Q15853 346 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-214ENST00000540865 ACSM3Q53FZ2 586 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 OGFRL1Q5TC84 451 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-214ENST00000540865 TMEM268Q5VZI3 342 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 SPAG16Q8N0X2 631 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 MS4A15Q8N5U1 240 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 STXBP6Q8NFX7 210 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 OR1L8Q8NGR8 309 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 OR1P1Q8NH06 330 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 DCANP1Q8TF63 244 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 APH1BQ8WW43 257 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 MAFIPQ8WZ33 124 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 SLC25A46Q96AG3 418 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 RAB3CQ96E17 227 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 TMEM80Q96HE8 168 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 KRTAP1-5Q9BYS1 174 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 NDUFA4L2Q9NRX3 87 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 SPATA2Q9UM82 520 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 KCNK7Q9Y2U2 307 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 NACAE9PAV3 2078 aa3.19□□□□□ -1.9
SNHG1-214ENST00000540865 IGKV1D-13A0A0B4J2D9 117 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 LOC100130705A0A1B0GUX0 176 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 HELTA6NFD8 242 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 EFCAB10A6NFE3 127 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 I3L2K1 104 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 MFNGO00587 321 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 SLC17A2O00624 439 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 DENRO43583 198 aaKnown RBP3.18□□□□□ -1.9
SNHG1-214ENST00000540865 GNG7O60262 68 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 WBP4O75554 376 aaKnown RBP3.18□□□□□ -1.9
SNHG1-214ENST00000540865 HPRT1P00492 218 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 IGKV1-13P0DP09 117 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms