RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 LY96Q9Y6Y9 160 aa7.04□□□□□ -1.28
CSDE1-215ENST00000533818 IGKV1D-13A0A0B4J2D9 117 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 IGKV1-13P0DP09 117 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 NFYAP23511 347 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-215ENST00000533818 ST3GAL4Q11206 333 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 LCE2AQ5TA79 106 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-215ENST00000533818 SPATA31B1PQ5VZV4 182 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 TMPRSS11AQ6ZMR5 421 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 SPATA24Q86W54 205 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 CMTM1Q8IZ96 169 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 PGLYRP3Q96LB9 341 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 TMEM56Q96MV1 263 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 ZNF446Q9NWS9 450 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 ARL2BPQ9Y2Y0 163 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 TIMM8BQ9Y5J9 83 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-215ENST00000533818 OR51B2Q9Y5P1 312 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 U3KQE9 123 aa7.03□□□□□ -1.28
CSDE1-215ENST00000533818 MFNGO00587 321 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 RBFOX2O43251 390 aaKnown RBP eCLIP7.02□□□□□ -1.29
CSDE1-215ENST00000533818 TNFSF12O43508 249 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 HPRT1P00492 218 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 LALBAP00709 142 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 PAX9P55771 341 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 B2MP61769 119 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 ODF1Q14990 250 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 ACOT6Q3I5F7 207 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-215ENST00000533818 EBLN2Q6P2I7 272 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 Q6ZRU5 148 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 ZFP41Q8N8Y5 198 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 CIRBP-AS1Q8TBR5 109 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 GABARAPL1Q9H0R8 117 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 NOP10Q9NPE3 64 aaKnown RBP7.02□□□□□ -1.29
CSDE1-215ENST00000533818 CLEC2DQ9UHP7 191 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 KCNK7Q9Y2U2 307 aa7.02□□□□□ -1.29
CSDE1-215ENST00000533818 IGKV1D-8A0A087WSZ0 117 aa7.01□□□□□ -1.29
CSDE1-215ENST00000533818 MARCH11A6NNE9 402 aa7.01□□□□□ -1.29
CSDE1-215ENST00000533818 K7EP13 123 aa7.01□□□□□ -1.29
CSDE1-215ENST00000533818 ADAP1O75689 374 aa7.01□□□□□ -1.29
CSDE1-215ENST00000533818 ETV1P50549 477 aa7.01□□□□□ -1.29
CSDE1-215ENST00000533818 OR56B1Q8NGI3 324 aa7.01□□□□□ -1.29
CSDE1-215ENST00000533818 NSG2Q9Y328 171 aa7.01□□□□□ -1.29
CSDE1-215ENST00000533818 FSIP2Q5CZC0 6907 aa7.01□□□□□ -1.29
CSDE1-215ENST00000533818 F6UB75 175 aa7□□□□□ -1.29
CSDE1-215ENST00000533818 SULT1C2O00338 296 aa7□□□□□ -1.29
CSDE1-215ENST00000533818 INSP01308 110 aa7□□□□□ -1.29
CSDE1-215ENST00000533818 HNRNPCP07910 306 aaKnown RBP eCLIP7□□□□□ -1.293e-6■■■□□ 18.5
CSDE1-215ENST00000533818 HTN1P15515 57 aa7□□□□□ -1.29
CSDE1-215ENST00000533818 EVI2AP22794 236 aa7□□□□□ -1.29
CSDE1-215ENST00000533818 ID1P41134 155 aa7□□□□□ -1.29
CSDE1-215ENST00000533818 P2RY14Q15391 338 aa7□□□□□ -1.29
CSDE1-215ENST00000533818 SIGLEC15Q6ZMC9 328 aa7□□□□□ -1.29
CSDE1-215ENST00000533818 TPRA1Q86W33 373 aa7□□□□□ -1.29
CSDE1-215ENST00000533818 COQ8AQ8NI60 647 aa7□□□□□ -1.29
CSDE1-215ENST00000533818 VSIG2Q96IQ7 327 aa7□□□□□ -1.29
CSDE1-215ENST00000533818 PNMA8CA0A1B0GUJ8 204 aa6.99□□□□□ -1.29
CSDE1-215ENST00000533818 SNAPC5O75971 98 aa6.99□□□□□ -1.29
CSDE1-215ENST00000533818 TALDO1P37837 337 aa6.99□□□□□ -1.29
CSDE1-215ENST00000533818 ERVK-16P61578 105 aa6.99□□□□□ -1.29
CSDE1-215ENST00000533818 LINC01620Q4KN68 170 aa6.99□□□□□ -1.29
CSDE1-215ENST00000533818 RBPMSQ93062 196 aaKnown RBP6.99□□□□□ -1.29
CSDE1-215ENST00000533818 LINC00467Q9BRT7 94 aa6.99□□□□□ -1.29
CSDE1-215ENST00000533818 PLEKHA2Q9HB19 425 aa6.99□□□□□ -1.29
CSDE1-215ENST00000533818 A0A0J9YX75 114 aa6.98□□□□□ -1.29
CSDE1-215ENST00000533818 TCRBV3S1A0A5B6 114 aa6.98□□□□□ -1.29
CSDE1-215ENST00000533818 CTXN2P0C2S0 81 aa6.98□□□□□ -1.29
CSDE1-215ENST00000533818 MAPK3P27361 379 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-215ENST00000533818 AMTNQ6UX39 209 aa6.98□□□□□ -1.29
CSDE1-215ENST00000533818 Q6ZS49 121 aa6.98□□□□□ -1.29
CSDE1-215ENST00000533818 LRTM2Q8N967 370 aa6.98□□□□□ -1.29
CSDE1-215ENST00000533818 RAB3CQ96E17 227 aa6.98□□□□□ -1.29
CSDE1-215ENST00000533818 C16orf74Q96GX8 76 aa6.98□□□□□ -1.29
CSDE1-215ENST00000533818 LINC01587Q99440 93 aa6.98□□□□□ -1.29
CSDE1-215ENST00000533818 MRPS18AQ9NVS2 196 aaKnown RBP6.98□□□□□ -1.29
CSDE1-215ENST00000533818 GAGE12BA1L429 117 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 M0R2Z0 102 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 CRXO43186 299 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-215ENST00000533818 GAGE7O76087 117 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 GAGE12FP0CL80 117 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 GAGE12GP0CL81 117 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 GAGE12IP0CL82 117 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 ELK1P19419 428 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 PSMB3P49720 205 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 ASAH1Q13510 395 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 FLOT2Q14254 428 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 SPINK13Q1W4C9 94 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 TMEM144Q7Z5S9 345 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 WDR12Q9GZL7 423 aaKnown RBP6.97□□□□□ -1.29
CSDE1-215ENST00000533818 DPH3P1Q9H4G8 78 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 FGF20Q9NP95 211 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-215ENST00000533818 CCL28Q9NRJ3 127 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 FKBP11Q9NYL4 201 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 COMMD9Q9P000 198 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 DOK5Q9P104 306 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 PRNDQ9UKY0 176 aa6.97□□□□□ -1.29
CSDE1-215ENST00000533818 A0A075B6Q4 140 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 CLN5O75503 358 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 SCGB2A1O75556 95 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 IGLV2-11P01706 119 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 CRYGDP07320 174 aa6.96□□□□□ -1.3
CSDE1-215ENST00000533818 GABRB1P18505 474 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms