RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 EDA2RQ9HAV5 297 aa3.91□□□□□ -1.78
ECHDC1-221ENST00000531582 SLC39A9Q9NUM3 307 aa3.91□□□□□ -1.78
ECHDC1-221ENST00000531582 C21orf62Q9NYP8 219 aa3.91□□□□□ -1.78
ECHDC1-221ENST00000531582 HIGD1BQ9P298 99 aa3.91□□□□□ -1.78
ECHDC1-221ENST00000531582 PCTPQ9UKL6 214 aa3.91□□□□□ -1.78
ECHDC1-221ENST00000531582 ZNF835Q9Y2P0 537 aa3.91□□□□□ -1.78
ECHDC1-221ENST00000531582 PAPPA2Q9BXP8 1791 aa3.91□□□□□ -1.78
ECHDC1-221ENST00000531582 PTPRBP23467 1997 aa3.91□□□□□ -1.78
ECHDC1-221ENST00000531582 SMIM28A0A1B0GU29 152 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 LOC107986453A0A1B0GWG9 222 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 FAM90A10PA6NDY2 464 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 C2orf70A6NJV1 201 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 C15orf61A6NNL5 157 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 NDUFC2-KCTD14E9PQ53 114 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 MGST3O14880 152 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 HLA-DQA1P01909 254 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 GATA2P23769 480 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 PTGDSP41222 190 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 CRYBA2P53672 197 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 CLDN2P57739 230 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 TAS2R45P59539 299 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 SLC38A11Q08AI6 406 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 KLF5Q13887 457 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 INSL4Q14641 139 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 ZNF141Q15928 474 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 ZNF791Q3KP31 576 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 Q56UQ5 140 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 MFSD12Q6NUT3 480 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 TMEM14EPQ6UXP3 125 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 ZNF841Q6ZN19 808 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 C2orf91Q6ZV80 131 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 TEN1Q86WV5 123 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 HOGA1Q86XE5 327 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 MEX3DQ86XN8 651 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 NPWQ8N729 165 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 ZNF645Q8N7E2 425 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 TMEM99Q8N816 258 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 PIFOQ8TCI5 191 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 LMX1AQ8TE12 382 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 TSKUQ8WUA8 353 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 LINC00479Q96M42 142 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 FAM103A1Q9BTL3 118 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 FZR1Q9UM11 496 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 RCL1Q9Y2P8 373 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 KLF13Q9Y2Y9 288 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 LY96Q9Y6Y9 160 aa3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 COL2A1P02458 1487 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-221ENST00000531582 LCTP09848 1927 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 PLXNB3Q9ULL4 1909 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 DOCK4Q8N1I0 1966 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 NUP98P52948 1817 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 PIGBOS1A0A0B4J2F0 54 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 TRBV7-7A0A0K0K1E9 115 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 GRIFINA4D1Z8 144 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 NEURL1O76050 574 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 CLDN14O95500 239 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 APCSP02743 223 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 CD55P08174 381 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 GATA1P15976 413 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 DLX1P56177 255 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 POLR2LP62875 67 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 RPL38P63173 70 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 CCL20P78556 96 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 SERF2P84101 59 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 PRDX1Q06830 199 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 TAF10Q12962 218 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 C1orf61Q13536 156 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 EBI3Q14213 229 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 ZNF718Q3SXZ3 478 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 LCN12Q6JVE5 192 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 GAGE2AQ6NT46 116 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 HRCT1Q6UXD1 115 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 ACP7Q6ZNF0 438 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 SLC25A48Q6ZT89 311 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 SBSPONQ8IVN8 264 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 FBXL14Q8N1E6 418 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 LINC01465Q8N7H1 131 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 LRTM2Q8N967 370 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 ZNF114Q8NC26 417 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 RNF128Q8TEB7 428 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 IGFBPL1Q8WX77 278 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 COPS9Q8WXC6 57 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 DPH3Q96FX2 82 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 TIMD4Q96H15 378 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 LINC01600Q96MT4 127 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 MRPL20Q9BYC9 149 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 RNASE7Q9H1E1 156 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 FBXL15Q9H469 300 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 PELI2Q9HAT8 420 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 GNB4Q9HAV0 340 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 C20orf141Q9NUB4 165 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 IL36BQ9NZH7 164 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 C11orf21Q9P2W6 132 aa3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 SIRT4Q9Y6E7 314 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 NCOA6Q14686 2063 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-221ENST00000531582 ZNF236Q9UL36 1845 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 PLXNA2O75051 1894 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 TRBV20-1A0A075B6N2 111 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 CCL15-CCL14A0A0B4J2E2 113 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 IGHV1-24A0A0C4DH33 117 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms