RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 OR5H2Q8NGV7 314 aa9.71□□□□□ -0.86
HIF3A-212ENST00000529205 FAM212BQ9NTI7 297 aaPredicted RBP9.71□□□□□ -0.86
HIF3A-212ENST00000529205 TMEM189A5PLL7 270 aa9.7□□□□□ -0.86
HIF3A-212ENST00000529205 MEIS3P1A6NDR6 274 aa9.7□□□□□ -0.86
HIF3A-212ENST00000529205 HELTA6NFD8 242 aa9.7□□□□□ -0.86
HIF3A-212ENST00000529205 RFX2P48378 723 aa9.7□□□□□ -0.86
HIF3A-212ENST00000529205 TAS2R46P59540 309 aa9.7□□□□□ -0.86
HIF3A-212ENST00000529205 MXD1Q05195 221 aa9.7□□□□□ -0.86
HIF3A-212ENST00000529205 DHRS2Q13268 280 aa9.7□□□□□ -0.86
HIF3A-212ENST00000529205 C1orf134Q5TEV5 83 aa9.7□□□□□ -0.86
HIF3A-212ENST00000529205 RAB40CQ96S21 281 aa9.7□□□□□ -0.86
HIF3A-212ENST00000529205 DNAH6Q9C0G6 4158 aa9.7□□□□□ -0.86
HIF3A-212ENST00000529205 A0A087WXM4 84 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 A0A1B0GU03 582 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 TEX48A0A1B0GUV7 120 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 PMP2P02689 132 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 CRYBB3P26998 211 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 PSMB9P28065 219 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 SDC2P34741 201 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 ALDH3B2P48448 385 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 SNRPD3P62318 126 aaKnown RBP9.69□□□□□ -0.86
HIF3A-212ENST00000529205 RNF212Q495C1 297 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 PSMG4Q5JS54 123 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 Q6ZRM9 215 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 OR5H6Q8NGV6 325 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 DCANP1Q8TF63 244 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 SLC25A38Q96DW6 304 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 YIPF6Q96EC8 236 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 S100A16Q96FQ6 103 aaKnown RBP9.69□□□□□ -0.86
HIF3A-212ENST00000529205 SEC22AQ96IW7 307 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 PDCD10Q9BUL8 212 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 KRTAP4-5Q9BYR2 181 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 RNF167Q9H6Y7 350 aa9.69□□□□□ -0.86
HIF3A-212ENST00000529205 TRAV30A0A087WSZ9 112 aa9.68□□□□□ -0.86
HIF3A-212ENST00000529205 CD74P04233 296 aa9.68□□□□□ -0.86
HIF3A-212ENST00000529205 TGFBR1P36897 503 aa9.68□□□□□ -0.86
HIF3A-212ENST00000529205 PHLDA2Q53GA4 152 aa9.68□□□□□ -0.86
HIF3A-212ENST00000529205 Q6ZR54 194 aa9.68□□□□□ -0.86
HIF3A-212ENST00000529205 SLC35G3Q8N808 338 aa9.68□□□□□ -0.86
HIF3A-212ENST00000529205 XCL2Q9UBD3 114 aa9.68□□□□□ -0.86
HIF3A-212ENST00000529205 SMIM9A6NGZ8 99 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 TMEM127O75204 238 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 CLN5O75503 358 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 OPRK1P41145 380 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 PPP5CP53041 499 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 EMP1P54849 157 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 TSPAN5P62079 268 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 TBC1D26Q86UD7 250 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 MAPKAPK5-AS1Q8N8E1 139 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 FCGR1BQ92637 280 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 NEU1Q99519 415 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 SCRT1Q9BWW7 348 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 NAA50Q9GZZ1 169 aaKnown RBP9.67□□□□□ -0.86
HIF3A-212ENST00000529205 ENY2Q9NPA8 101 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 FAT2Q9NYQ8 4349 aa9.67□□□□□ -0.86
HIF3A-212ENST00000529205 DNAH2Q9P225 4427 aa9.66□□□□□ -0.86
HIF3A-212ENST00000529205 MUC4Q99102 2169 aa9.66□□□□□ -0.86
HIF3A-212ENST00000529205 C16orf90A8MZG2 172 aa9.66□□□□□ -0.86
HIF3A-212ENST00000529205 CDK2AP2O75956 126 aa9.66□□□□□ -0.86
HIF3A-212ENST00000529205 ATG12O94817 140 aa9.66□□□□□ -0.86
HIF3A-212ENST00000529205 OR4X1Q8NH49 305 aa9.66□□□□□ -0.86
HIF3A-212ENST00000529205 Q8WTZ3 238 aa9.66□□□□□ -0.86
HIF3A-212ENST00000529205 MRGPRFQ96AM1 343 aa9.66□□□□□ -0.86
HIF3A-212ENST00000529205 FXYD6Q9H0Q3 95 aa9.66□□□□□ -0.86
HIF3A-212ENST00000529205 SEPSECSQ9HD40 501 aaKnown RBP9.66□□□□□ -0.86
HIF3A-212ENST00000529205 INS-IGF2F8WCM5 200 aa9.65□□□□□ -0.86
HIF3A-212ENST00000529205 HOXA1P49639 335 aaPredicted RBP9.65□□□□□ -0.86
HIF3A-212ENST00000529205 SPINK9Q5DT21 86 aa9.65□□□□□ -0.86
HIF3A-212ENST00000529205 NIPSNAP3BQ9BS92 247 aa9.65□□□□□ -0.86
HIF3A-212ENST00000529205 MRPS26Q9BYN8 205 aaKnown RBP9.65□□□□□ -0.86
HIF3A-212ENST00000529205 TMED3Q9Y3Q3 217 aa9.65□□□□□ -0.86
HIF3A-212ENST00000529205 RFNGQ9Y644 331 aa9.65□□□□□ -0.86
HIF3A-212ENST00000529205 IGHV3OR16-12A0A075B7B8 117 aa9.64□□□□□ -0.87
HIF3A-212ENST00000529205 RPS10-NUDT3A0A1W2PQS6 291 aa9.64□□□□□ -0.87
HIF3A-212ENST00000529205 HNRNPCP07910 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
HIF3A-212ENST00000529205 CLEC2LP0C7M8 214 aa9.64□□□□□ -0.87
HIF3A-212ENST00000529205 NAT1P18440 290 aa9.64□□□□□ -0.87
HIF3A-212ENST00000529205 PRSS3P35030 304 aa9.64□□□□□ -0.87
HIF3A-212ENST00000529205 HRH1P35367 487 aa9.64□□□□□ -0.87
HIF3A-212ENST00000529205 RPL5P46777 297 aaKnown RBP9.64□□□□□ -0.87
HIF3A-212ENST00000529205 AKR1C2P52895 323 aa9.64□□□□□ -0.87
HIF3A-212ENST00000529205 FAM3BP58499 235 aaPredicted RBP9.64□□□□□ -0.87
HIF3A-212ENST00000529205 TMEM69Q5SWH9 247 aa9.64□□□□□ -0.87
HIF3A-212ENST00000529205 C16orf54Q6UWD8 224 aa9.64□□□□□ -0.87
HIF3A-212ENST00000529205 ABCA13Q86UQ4 5058 aa9.64□□□□□ -0.87
HIF3A-212ENST00000529205 DYNC1H1Q14204 4646 aaKnown RBP9.63□□□□□ -0.87
HIF3A-212ENST00000529205 DNAH11Q96DT5 4516 aa9.63□□□□□ -0.87
HIF3A-212ENST00000529205 LOC100506127A0A0U1RQW1 187 aa9.63□□□□□ -0.87
HIF3A-212ENST00000529205 H3BMM0 161 aa9.63□□□□□ -0.87
HIF3A-212ENST00000529205 IGKV1-39P01597 117 aa9.63□□□□□ -0.87
HIF3A-212ENST00000529205 IGKV1D-39P04432 117 aa9.63□□□□□ -0.87
HIF3A-212ENST00000529205 HTN3P15516 51 aa9.63□□□□□ -0.87
HIF3A-212ENST00000529205 HLA-DMAP28067 261 aa9.63□□□□□ -0.87
HIF3A-212ENST00000529205 TAS2R20P59543 309 aa9.63□□□□□ -0.87
HIF3A-212ENST00000529205 ZNF705AQ6ZN79 300 aaPredicted RBP9.63□□□□□ -0.87
HIF3A-212ENST00000529205 CROCCP3Q8IVE0 287 aa9.63□□□□□ -0.87
HIF3A-212ENST00000529205 ATG101Q9BSB4 218 aa9.63□□□□□ -0.87
HIF3A-212ENST00000529205 FUNDC2Q9BWH2 189 aa9.63□□□□□ -0.87
HIF3A-212ENST00000529205 NRN1Q9NPD7 142 aa9.63□□□□□ -0.87
HIF3A-212ENST00000529205 ANAPC10Q9UM13 185 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms