RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 SUPT4H1P63272 117 aaKnown RBP1.44□□□□□ -2.18
BRCA2-203ENST00000528762 SLC38A11Q08AI6 406 aa1.44□□□□□ -2.18
BRCA2-203ENST00000528762 STX12Q86Y82 276 aa1.44□□□□□ -2.18
BRCA2-203ENST00000528762 PFN4Q8NHR9 129 aa1.44□□□□□ -2.18
BRCA2-203ENST00000528762 SLC25A40Q8TBP6 338 aa1.44□□□□□ -2.18
BRCA2-203ENST00000528762 DNAJC9Q8WXX5 260 aa1.44□□□□□ -2.18
BRCA2-203ENST00000528762 C2orf50Q96LR7 162 aa1.44□□□□□ -2.18
BRCA2-203ENST00000528762 TMEM133Q9H2Q1 129 aa1.44□□□□□ -2.18
BRCA2-203ENST00000528762 SLC39A9Q9NUM3 307 aa1.44□□□□□ -2.18
BRCA2-203ENST00000528762 PRNDQ9UKY0 176 aa1.44□□□□□ -2.18
BRCA2-203ENST00000528762 PYCARDQ9ULZ3 195 aa1.44□□□□□ -2.18
BRCA2-203ENST00000528762 BRWD1Q9NSI6 2320 aa1.44□□□□□ -2.18
BRCA2-203ENST00000528762 OBSL1O75147 1896 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 NUP210LQ5VU65 1888 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 SCN8AQ9UQD0 1980 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 HEATR5BQ9P2D3 2071 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 TRBV19A0A075B6N1 114 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 MEIS3P1A6NDR6 274 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 OR51F1A6NGY5 319 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 ZNF705FA8MVS1 300 aaPredicted RBP1.43□□□□□ -2.18
BRCA2-203ENST00000528762 C19orf84I3L1E1 186 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 PGRMC1O00264 195 aaKnown RBP1.43□□□□□ -2.18
BRCA2-203ENST00000528762 NAPSAO96009 420 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 IFNA1P01562 189 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 TRGC1P0CF51 173 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 ERP29P30040 261 aaKnown RBP1.43□□□□□ -2.18
BRCA2-203ENST00000528762 ATP5G3P48201 142 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 AQP4P55087 323 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 DEFA3P59666 94 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 GNG3P63215 75 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 DEFB103AP81534 67 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 LCA10Q71F78 164 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 MIR17HGQ75NE6 70 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 CLVS1Q8IUQ0 354 aaPredicted RBP1.43□□□□□ -2.18
BRCA2-203ENST00000528762 EXOC3-AS1Q8N2X6 119 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 SMIM20Q8N5G0 67 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 SPACA4Q8TDM5 124 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 C11orf40Q8WZ69 217 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 GPR146Q96CH1 333 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 ADAT3Q96EY9 351 aaPredicted RBP1.43□□□□□ -2.18
BRCA2-203ENST00000528762 GINS4Q9BRT9 223 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 GINS3Q9BRX5 216 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 TVP23BQ9NYZ1 205 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 ATPIF1Q9UII2 106 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 ERGIC3Q9Y282 383 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 UTP11Q9Y3A2 253 aaKnown RBP1.43□□□□□ -2.18
BRCA2-203ENST00000528762 UFC1Q9Y3C8 167 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 AMMECR1Q9Y4X0 333 aaPredicted RBP1.43□□□□□ -2.18
BRCA2-203ENST00000528762 PCDH15Q96QU1 1955 aa1.43□□□□□ -2.18
BRCA2-203ENST00000528762 RIC1Q4ADV7 1423 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 MIA2Q96PC5 1412 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 SBF1O95248 1867 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 ZNF860A6NHJ4 632 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 J3QRK9 145 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 HMGB3O15347 200 aaKnown RBP1.42□□□□□ -2.18
BRCA2-203ENST00000528762 MFSD11O43934 449 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 CIAO1O76071 339 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 RPSAP08865 295 aaKnown RBP1.42□□□□□ -2.18
BRCA2-203ENST00000528762 SMIM17P0DL12 118 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 S100A4P26447 101 aaKnown RBP1.42□□□□□ -2.18
BRCA2-203ENST00000528762 FXYD2P54710 66 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 TAS2R41P59536 307 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 LINC01554Q52M75 96 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 TRAPPC6BQ86SZ2 158 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 HIST3H2BBQ8N257 126 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 C9orf163Q8N9P6 203 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 C8orf4Q9NR00 106 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 CKLFQ9UBR5 152 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 ROCK1Q13464 1354 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 KIF24Q5T7B8 1368 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 VWDEQ8N2E2 1590 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 PBRM1Q86U86 1689 aa1.42□□□□□ -2.18
BRCA2-203ENST00000528762 COL5A3P25940 1745 aaPredicted RBP1.41□□□□□ -2.18
BRCA2-203ENST00000528762 MEIKINA0A087WXM9 373 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 IGKV1-9A0A0C4DH69 117 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 CLDN25C9JDP6 229 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 ORC5O43913 435 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 ATG12O94817 140 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 METTL15P1P0C7V9 234 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 SPI1P17947 270 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 CASP1P29466 404 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 TMEM155Q4W5P6 130 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 BPIFA4PQ86YQ2 179 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 KRTAP13-1Q8IUC0 172 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 SIGLECL1Q8N7X8 197 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 HSPB9Q9BQS6 159 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 SH3BGRL3Q9H299 93 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 CST9LQ9H4G1 147 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 SS18L2Q9UHA2 77 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 SDK1Q7Z5N4 2213 aa1.41□□□□□ -2.18
BRCA2-203ENST00000528762 FMN1Q68DA7 1419 aa1.4□□□□□ -2.18
BRCA2-203ENST00000528762 ANAPC1Q9H1A4 1944 aa1.4□□□□□ -2.18
BRCA2-203ENST00000528762 MED1Q15648 1581 aaPredicted RBP1.4□□□□□ -2.19
BRCA2-203ENST00000528762 SDCBPO00560 298 aaPredicted RBP1.4□□□□□ -2.19
BRCA2-203ENST00000528762 PIGPP57054 158 aa1.4□□□□□ -2.19
BRCA2-203ENST00000528762 YPEL3P61236 119 aaPredicted RBP1.4□□□□□ -2.19
BRCA2-203ENST00000528762 NCALDP61601 193 aa1.4□□□□□ -2.19
BRCA2-203ENST00000528762 GNG5P63218 68 aa1.4□□□□□ -2.19
BRCA2-203ENST00000528762 ARHGAP11BQ3KRB8 267 aa1.4□□□□□ -2.19
BRCA2-203ENST00000528762 KHDC3LQ587J8 217 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms