RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 H2AFB2P0C5Z0 115 aa12.35□□□□□ -0.43
PABPC1-221ENST00000522720 HTR2BP41595 481 aa12.35□□□□□ -0.43
PABPC1-221ENST00000522720 OXA1LQ15070 435 aa12.35□□□□□ -0.43
PABPC1-221ENST00000522720 HEYLQ9NQ87 328 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-221ENST00000522720 DAZ1Q9NQZ3 744 aaKnown RBP12.35□□□□□ -0.43
PABPC1-221ENST00000522720 C19orf73Q9NVV2 129 aa12.35□□□□□ -0.43
PABPC1-221ENST00000522720 CEBPZOSA8MTT3 80 aa12.34□□□□□ -0.43
PABPC1-221ENST00000522720 GNG7O60262 68 aa12.34□□□□□ -0.43
PABPC1-221ENST00000522720 VAMP1P23763 118 aa12.34□□□□□ -0.43
PABPC1-221ENST00000522720 BTCP35070 178 aa12.34□□□□□ -0.43
PABPC1-221ENST00000522720 NPBWR1P48145 328 aa12.34□□□□□ -0.43
PABPC1-221ENST00000522720 UBE2MP61081 183 aaKnown RBP12.34□□□□□ -0.43
PABPC1-221ENST00000522720 RELQ04864 619 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-221ENST00000522720 SMCO1Q147U7 214 aa12.34□□□□□ -0.43
PABPC1-221ENST00000522720 ANKRD55Q3KP44 614 aa12.34□□□□□ -0.43
PABPC1-221ENST00000522720 SBSPONQ8IVN8 264 aa12.34□□□□□ -0.43
PABPC1-221ENST00000522720 TMEM61Q8N0U2 210 aa12.34□□□□□ -0.43
PABPC1-221ENST00000522720 CENPSQ8N2Z9 138 aa12.34□□□□□ -0.43
PABPC1-221ENST00000522720 LRTM2Q8N967 370 aa12.34□□□□□ -0.43
PABPC1-221ENST00000522720 WDR89Q96FK6 387 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-221ENST00000522720 ZNF414Q96IQ9 312 aa12.34□□□□□ -0.43
PABPC1-221ENST00000522720 STAB2Q8WWQ8 2551 aa12.33□□□□□ -0.43
PABPC1-221ENST00000522720 A0A1B0GU03 582 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 DUXBA0A1W2PPF3 345 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 C15orf62A8K5M9 175 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 INMT-MINDY4F8WBC2 141 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 SFT2D2O95562 160 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 PPP1R1AQ13522 171 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 GUCA2BQ16661 112 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 C2orf83Q53S99 150 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 BTNL8Q6UX41 500 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 MARVELD1Q9BSK0 173 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 C20orf24Q9BUV8 137 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 FNDC4Q9H6D8 234 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-221ENST00000522720 HSPB7Q9UBY9 170 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 SELENOKQ9Y6D0 94 aa12.33□□□□□ -0.44
PABPC1-221ENST00000522720 IGHV3OR16-8A0A075B7F1 116 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 TRAV25A0A0B4J276 109 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 PRAF2O60831 178 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 TMEM50AO95807 157 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 CD7P09564 240 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 OPRK1P41145 380 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 TNFRSF9Q07011 255 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 MLANAQ16655 118 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 OR10C1Q96KK4 312 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 NEURL2Q9BR09 285 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 HIPK2Q9H2X6 1198 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 NUDT15Q9NV35 164 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 U3KQK5 164 aa12.32□□□□□ -0.44
PABPC1-221ENST00000522720 ZNF207O43670 478 aaKnown RBP12.31□□□□□ -0.44
PABPC1-221ENST00000522720 YIF1AO95070 293 aa12.31□□□□□ -0.44
PABPC1-221ENST00000522720 NXPH3O95157 252 aa12.31□□□□□ -0.44
PABPC1-221ENST00000522720 SLC25A6P12236 298 aa12.31□□□□□ -0.44
PABPC1-221ENST00000522720 CD81P60033 236 aa12.31□□□□□ -0.44
PABPC1-221ENST00000522720 NOXA1Q86UR1 476 aa12.31□□□□□ -0.44
PABPC1-221ENST00000522720 SLC24A4Q8NFF2 622 aa12.31□□□□□ -0.44
PABPC1-221ENST00000522720 OR4X1Q8NH49 305 aa12.31□□□□□ -0.44
PABPC1-221ENST00000522720 RNASEH2CQ8TDP1 164 aaKnown RBP12.31□□□□□ -0.44
PABPC1-221ENST00000522720 TMEM170AQ8WVE7 144 aa12.31□□□□□ -0.44
PABPC1-221ENST00000522720 C20orf85Q9H1P6 137 aa12.31□□□□□ -0.44
PABPC1-221ENST00000522720 GPN1Q9HCN4 374 aaPredicted RBP12.31□□□□□ -0.44
PABPC1-221ENST00000522720 MRPL36Q9P0J6 103 aaKnown RBP12.31□□□□□ -0.44
PABPC1-221ENST00000522720 TRAV6A0A075B6T7 132 aa12.3□□□□□ -0.44
PABPC1-221ENST00000522720 PITX3O75364 302 aa12.3□□□□□ -0.44
PABPC1-221ENST00000522720 CLN5O75503 358 aa12.3□□□□□ -0.44
PABPC1-221ENST00000522720 SCAF4O95104 1147 aaKnown RBP12.3□□□□□ -0.44
PABPC1-221ENST00000522720 IL5P05113 134 aa12.3□□□□□ -0.44
PABPC1-221ENST00000522720 RBPMS2Q6ZRY4 209 aaKnown RBP12.3□□□□□ -0.44
PABPC1-221ENST00000522720 OR1S1Q8NH92 325 aa12.3□□□□□ -0.44
PABPC1-221ENST00000522720 TUBA4BQ9H853 241 aa12.3□□□□□ -0.44
PABPC1-221ENST00000522720 SMPXQ9UHP9 88 aa12.3□□□□□ -0.44
PABPC1-221ENST00000522720 FLVCR2Q9UPI3 526 aa12.3□□□□□ -0.44
PABPC1-221ENST00000522720 TMED3Q9Y3Q3 217 aa12.3□□□□□ -0.44
PABPC1-221ENST00000522720 U3KQ87 197 aa12.3□□□□□ -0.44
PABPC1-221ENST00000522720 HUWE1Q7Z6Z7 4374 aaKnown RBP12.29□□□□□ -0.44
PABPC1-221ENST00000522720 RPS10-NUDT3A0A1W2PQS6 291 aa12.29□□□□□ -0.44
PABPC1-221ENST00000522720 C9orf170A2RU37 121 aa12.29□□□□□ -0.44
PABPC1-221ENST00000522720 NPY1RP25929 384 aa12.29□□□□□ -0.44
PABPC1-221ENST00000522720 TOMM20LQ6UXN7 152 aa12.29□□□□□ -0.44
PABPC1-221ENST00000522720 ZNF600Q6ZNG1 722 aa12.29□□□□□ -0.44
PABPC1-221ENST00000522720 SLC16A13Q7RTY0 426 aa12.29□□□□□ -0.44
PABPC1-221ENST00000522720 DTD1Q8TEA8 209 aa12.29□□□□□ -0.44
PABPC1-221ENST00000522720 RBKSQ9H477 322 aa12.29□□□□□ -0.44
PABPC1-221ENST00000522720 TENM3Q9P273 2699 aa12.29□□□□□ -0.44
PABPC1-221ENST00000522720 TRAV14DV4A0A0A6YYC5 116 aa12.28□□□□□ -0.44
PABPC1-221ENST00000522720 IGHV7-4-1A0A0J9YVY3 117 aa12.28□□□□□ -0.44
PABPC1-221ENST00000522720 OR11H12B2RN74 326 aa12.28□□□□□ -0.44
PABPC1-221ENST00000522720 TSPAN4O14817 238 aa12.28□□□□□ -0.44
PABPC1-221ENST00000522720 IFNA10P01566 189 aa12.28□□□□□ -0.44
PABPC1-221ENST00000522720 ATP5IP56385 69 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-221ENST00000522720 C4orf46Q504U0 113 aa12.28□□□□□ -0.44
PABPC1-221ENST00000522720 LAMTOR1Q6IAA8 161 aa12.28□□□□□ -0.44
PABPC1-221ENST00000522720 OR52B4Q8NGK2 314 aa12.28□□□□□ -0.44
PABPC1-221ENST00000522720 GINS3Q9BRX5 216 aa12.28□□□□□ -0.44
PABPC1-221ENST00000522720 PUS1Q9Y606 427 aaKnown RBP eCLIP12.28□□□□□ -0.44
PABPC1-221ENST00000522720 TRAV30A0A087WSZ9 112 aa12.27□□□□□ -0.45
PABPC1-221ENST00000522720 SNRPGP15A8MWD9 76 aa12.27□□□□□ -0.45
PABPC1-221ENST00000522720 FAM90A26D6RGX4 464 aa12.27□□□□□ -0.45
PABPC1-221ENST00000522720 CHEK1O14757 476 aa12.27□□□□□ -0.45
PABPC1-221ENST00000522720 SCGB2A1O75556 95 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms