RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 GSG1LQ6UXU4 331 aa7.37□□□□□ -1.23
CLDND1-231ENST00000515620 ZNF114Q8NC26 417 aa7.37□□□□□ -1.23
CLDND1-231ENST00000515620 NARS2Q96I59 477 aaKnown RBP7.37□□□□□ -1.23
CLDND1-231ENST00000515620 SRRM2Q9UQ35 2752 aaKnown RBP7.37□□□□□ -1.23
CLDND1-231ENST00000515620 LOC102723971A0A1B0GUV8 181 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 RPS10-NUDT3A0A1W2PQS6 291 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 FAM90A26D6RGX4 464 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 NUDT3O95989 172 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 HLA-DRB4P13762 266 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 LPAR6P43657 344 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 EIF2B2P49770 351 aaKnown RBP7.36□□□□□ -1.23
CLDND1-231ENST00000515620 DLK1P80370 383 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 OGFRL1Q5TC84 451 aaPredicted RBP7.36□□□□□ -1.23
CLDND1-231ENST00000515620 BEST4Q8NFU0 473 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 TSPAN14Q8NG11 270 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 FCAMRQ8WWV6 532 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 KRTAP1-5Q9BYS1 174 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 CCDC90BQ9GZT6 254 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 FKBP11Q9NYL4 201 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 HLA-DRB4X5D2U9 266 aa7.36□□□□□ -1.23
CLDND1-231ENST00000515620 SMIM30A4D0T7 59 aa7.35□□□□□ -1.23
CLDND1-231ENST00000515620 CASQ2O14958 399 aaPredicted RBP7.35□□□□□ -1.23
CLDND1-231ENST00000515620 TMEM50AO95807 157 aa7.35□□□□□ -1.23
CLDND1-231ENST00000515620 FCER2P06734 321 aa7.35□□□□□ -1.23
CLDND1-231ENST00000515620 F2RP25116 425 aa7.35□□□□□ -1.23
CLDND1-231ENST00000515620 CCL18P55774 89 aa7.35□□□□□ -1.23
CLDND1-231ENST00000515620 XGP55808 180 aa7.35□□□□□ -1.23
CLDND1-231ENST00000515620 C10orf67Q8IYJ2 551 aa7.35□□□□□ -1.23
CLDND1-231ENST00000515620 LINC00588Q9Y4M8 146 aa7.35□□□□□ -1.23
CLDND1-231ENST00000515620 UBR4Q5T4S7 5183 aa7.35□□□□□ -1.23
CLDND1-231ENST00000515620 HBE1P02100 147 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 BTF3P20290 206 aaKnown RBP7.34□□□□□ -1.23
CLDND1-231ENST00000515620 RAB3BP20337 219 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 MYL9P24844 172 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 GNRHRP30968 328 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 FUSP35637 526 aaKnown RBP eCLIP7.34□□□□□ -1.23
CLDND1-231ENST00000515620 DEFB1P60022 68 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 HERV-K104P61576 105 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 PRCDQ00LT1 54 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 SPINK9Q5DT21 86 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 GDF5OSQ5U4N7 250 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 CADM3Q8N126 398 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 GLMPQ8WWB7 406 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 TMEM230Q96A57 120 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 TSC22D3Q99576 134 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 C7orf50Q9BRJ6 194 aaKnown RBP7.34□□□□□ -1.23
CLDND1-231ENST00000515620 ACOT13Q9NPJ3 140 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 MDFICQ9P1T7 246 aa7.34□□□□□ -1.23
CLDND1-231ENST00000515620 TRAV1-2A0A0B4J238 106 aa7.33□□□□□ -1.24
CLDND1-231ENST00000515620 MLLT11Q13015 90 aaPredicted RBP7.33□□□□□ -1.24
CLDND1-231ENST00000515620 RRN3P1Q2M238 152 aa7.33□□□□□ -1.24
CLDND1-231ENST00000515620 TTC32Q5I0X7 151 aa7.33□□□□□ -1.24
CLDND1-231ENST00000515620 C16orf54Q6UWD8 224 aa7.33□□□□□ -1.24
CLDND1-231ENST00000515620 SSX7Q7RTT5 188 aa7.33□□□□□ -1.24
CLDND1-231ENST00000515620 ZNF709Q8N972 641 aa7.33□□□□□ -1.24
CLDND1-231ENST00000515620 LGALS14Q8TCE9 139 aa7.33□□□□□ -1.24
CLDND1-231ENST00000515620 BORCS5Q969J3 196 aa7.33□□□□□ -1.24
CLDND1-231ENST00000515620 NRN1Q9NPD7 142 aa7.33□□□□□ -1.24
CLDND1-231ENST00000515620 PTTG2Q9NZH5 202 aa7.33□□□□□ -1.24
CLDND1-231ENST00000515620 MRPL36Q9P0J6 103 aaKnown RBP7.33□□□□□ -1.24
CLDND1-231ENST00000515620 GOLT1BQ9Y3E0 138 aa7.33□□□□□ -1.24
CLDND1-231ENST00000515620 F5H768 121 aa7.32□□□□□ -1.24
CLDND1-231ENST00000515620 PGLYRP1O75594 196 aaPredicted RBP7.32□□□□□ -1.24
CLDND1-231ENST00000515620 SCGNO76038 276 aa7.32□□□□□ -1.24
CLDND1-231ENST00000515620 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
CLDND1-231ENST00000515620 ALDH3B2P48448 385 aa7.32□□□□□ -1.24
CLDND1-231ENST00000515620 AP2S1P53680 142 aaPredicted RBP7.32□□□□□ -1.24
CLDND1-231ENST00000515620 ERHP84090 104 aaKnown RBP7.32□□□□□ -1.24
CLDND1-231ENST00000515620 CLINT1Q14677 625 aa7.32□□□□□ -1.24
CLDND1-231ENST00000515620 TIGITQ495A1 244 aa7.32□□□□□ -1.24
CLDND1-231ENST00000515620 HOGA1Q86XE5 327 aa7.32□□□□□ -1.24
CLDND1-231ENST00000515620 PACRGLQ8N7B6 248 aa7.32□□□□□ -1.24
CLDND1-231ENST00000515620 OR4B1Q8NGF8 309 aa7.32□□□□□ -1.24
CLDND1-231ENST00000515620 OR4A16Q8NH70 328 aa7.32□□□□□ -1.24
CLDND1-231ENST00000515620 SLC35B3Q9H1N7 401 aa7.32□□□□□ -1.24
CLDND1-231ENST00000515620 Q9H8V8 135 aa7.32□□□□□ -1.24
CLDND1-231ENST00000515620 CLN5O75503 358 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 SCGB2A1O75556 95 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 IGKV1-17P01599 117 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 SMR3BP02814 79 aaPredicted RBP7.31□□□□□ -1.24
CLDND1-231ENST00000515620 DEFB130BP0DP73 79 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 DEFB130AP0DP74 79 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 SNCAP37840 140 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 NKX2-1P43699 371 aaPredicted RBP7.31□□□□□ -1.24
CLDND1-231ENST00000515620 H2BFWTQ7Z2G1 175 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 C1orf158Q8N1D5 194 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 MGLLQ99685 303 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 Q9H3A6 140 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 C8orf4Q9NR00 106 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 SCN3BQ9NY72 215 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 DAPK2Q9UIK4 370 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 U3KQE9 123 aa7.31□□□□□ -1.24
CLDND1-231ENST00000515620 FAT1Q14517 4588 aa7.3□□□□□ -1.24
CLDND1-231ENST00000515620 HNRNPCP07910 306 aaKnown RBP eCLIP7.3□□□□□ -1.24
CLDND1-231ENST00000515620 OPRK1P41145 380 aa7.3□□□□□ -1.24
CLDND1-231ENST00000515620 HOXA1P49639 335 aaPredicted RBP7.3□□□□□ -1.24
CLDND1-231ENST00000515620 HSPE1P61604 102 aaKnown RBP7.3□□□□□ -1.24
CLDND1-231ENST00000515620 SIGLEC15Q6ZMC9 328 aa7.3□□□□□ -1.24
CLDND1-231ENST00000515620 CMTM1Q8IZ96 169 aa7.3□□□□□ -1.24
CLDND1-231ENST00000515620 OR5AP2Q8NGF4 316 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms