RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 M6PRP20645 277 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 SNCAP37840 140 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 HSPE1P61604 102 aaKnown RBP6.52□□□□□ -1.37
CCL28-204ENST00000514421 RPP30P78346 268 aaKnown RBP6.52□□□□□ -1.37
CCL28-204ENST00000514421 SLC38A11Q08AI6 406 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 PMS2P11Q13670 270 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 BSXQ3C1V8 233 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 NSUN5P1Q3KNT7 163 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 VMA21Q3ZAQ7 101 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 SPANXN5Q5MJ07 72 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 HIST2H2BDQ6DRA6 164 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 C10orf99Q6UWK7 81 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 PPP1R27Q86WC6 154 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 TMEM217Q8N7C4 229 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 BPIFCQ8NFQ6 507 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 OR5B3Q8NH48 314 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 OR4A16Q8NH70 328 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 OR4A5Q8NH83 315 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 HARBI1Q96MB7 349 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 TMEM147Q9BVK8 224 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 FKBP11Q9NYL4 201 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 PRNDQ9UKY0 176 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 TNCP24821 2201 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 TRAV3A0A0B4J244 114 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 TRAV41A0A0B4J266 112 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 G3V318 75 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 CNIH1O95406 144 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 CA2P00918 260 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 IGHG4P01861 327 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 EGR2P11161 476 aaPredicted RBP6.51□□□□□ -1.37
CCL28-204ENST00000514421 PPIFP30405 207 aaKnown RBP6.51□□□□□ -1.37
CCL28-204ENST00000514421 PRCDQ00LT1 54 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 FOXE3Q13461 319 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 FXYD3Q14802 87 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 AKIRIN2Q53H80 203 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 SPSB3Q6PJ21 355 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 VKORC1L1Q8N0U8 176 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 OR4F17Q8NGA8 305 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 OR10P1Q8NGE3 313 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 FAM110DQ8TAY7 271 aaPredicted RBP6.51□□□□□ -1.37
CCL28-204ENST00000514421 TMEM167AQ8TBQ9 72 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 MBD3L1Q8WWY6 194 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 TMEM68Q96MH6 324 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 OR4F4Q96R69 305 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 SEC11CQ9BY50 192 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 HRH4Q9H3N8 390 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 UQCC1Q9NVA1 299 aa6.51□□□□□ -1.37
CCL28-204ENST00000514421 CEBPZOSA8MTT3 80 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 ADARB2-AS1A8MUL3 147 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 ATP6V0E1O15342 81 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 MPDU1O75352 247 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 NDUFS6O75380 124 aaKnown RBP6.5□□□□□ -1.37
CCL28-204ENST00000514421 KBTBD11O94819 623 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 TSPAN15O95858 294 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 IFNA17P01571 189 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 CAMLGP49069 296 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 FHITP49789 147 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 CRIP2P52943 208 aaPredicted RBP6.5□□□□□ -1.37
CCL28-204ENST00000514421 OR2B8PP59922 312 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 DLK1P80370 383 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 SRSF3P84103 164 aaKnown RBP6.5□□□□□ -1.37
CCL28-204ENST00000514421 RUNX1Q01196 453 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 CFHR3Q02985 330 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 PRSS8Q16651 343 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 TMEM182Q6ZP80 229 aaPredicted RBP6.5□□□□□ -1.37
CCL28-204ENST00000514421 MMD2Q8IY49 270 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 LILRB2Q8N423 598 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 RNF152Q8N8N0 203 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 VSTM2AQ8TAG5 236 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 SCGB1C1Q8TD33 95 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 ABHD5Q8WTS1 349 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 TMEM170AQ8WVE7 144 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 WDR83OSQ9Y284 106 aa6.5□□□□□ -1.37
CCL28-204ENST00000514421 TEX50A0A1B0GTY4 177 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 A0A1W2PRX2 142 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 ACTL6BO94805 426 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 IGLV1-40P01703 118 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 HBE1P02100 147 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 SAA1P0DJI8 122 aaPredicted RBP6.49□□□□□ -1.37
CCL28-204ENST00000514421 ADCYAP1P18509 176 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 PSMB8P28062 276 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 CDX1P47902 265 aaPredicted RBP6.49□□□□□ -1.37
CCL28-204ENST00000514421 RAB9AP51151 201 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 GNB1P62873 340 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 NDPQ00604 133 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 ECSCRQ19T08 205 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 MRGPRG-AS1Q2M3A8 158 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 KHDC1LQ5JSQ8 128 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 AKR1C8PQ5T2L2 129 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 PVRIGQ6DKI7 326 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 UNQ5815/PRO19632Q6UWF5 114 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 SSX9Q7RTT3 188 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 FAM213BQ8TBF2 198 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 ARPC1AQ92747 370 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 FAM103A1Q9BTL3 118 aaKnown RBP6.49□□□□□ -1.37
CCL28-204ENST00000514421 TPSG1Q9NRR2 321 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 NDUFA4L2Q9NRX3 87 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 RPRMQ9NS64 109 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 FBXO7Q9Y3I1 522 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 LSM4Q9Y4Z0 139 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms