RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CCL19Q99731 98 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 SDF2L1Q9HCN8 221 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 M0R1W7 72 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 TOX4O94842 621 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 GCHFRP30047 84 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 EAF1Q96JC9 268 aaPredicted RBP11.88□□□□□ -0.51
PHF3-209ENST00000509330 CXCL1P09341 107 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 OR5G3P0C626 314 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 ORM2P19652 201 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 CFHR4Q92496 578 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 KCNIP2Q9NS61 270 aa11.88□□□□□ -0.51
PHF3-209ENST00000509330 ABCA2Q9BZC7 2435 aa11.87□□□□□ -0.51
PHF3-209ENST00000509330 TEX22C9J3V5 150 aa11.87□□□□□ -0.51
PHF3-209ENST00000509330 CYP2G1PQ6ZSU1 146 aa11.87□□□□□ -0.51
PHF3-209ENST00000509330 Q8WTZ3 238 aa11.87□□□□□ -0.51
PHF3-209ENST00000509330 PERPQ96FX8 193 aa11.87□□□□□ -0.51
PHF3-209ENST00000509330 DMRT1Q9Y5R6 373 aa11.87□□□□□ -0.51
PHF3-209ENST00000509330 CEACAM3P40198 252 aa11.87□□□□□ -0.51
PHF3-209ENST00000509330 RPS10P46783 165 aaKnown RBP11.87□□□□□ -0.51
PHF3-209ENST00000509330 LMO4P61968 165 aa11.87□□□□□ -0.51
PHF3-209ENST00000509330 TMEM241Q24JQ0 296 aa11.87□□□□□ -0.51
PHF3-209ENST00000509330 PTPN13Q12923 2485 aa11.87□□□□□ -0.51
PHF3-209ENST00000509330 SH2D7A6NKC9 451 aaPredicted RBP11.86□□□□□ -0.51
PHF3-209ENST00000509330 ODF3BA8MYP8 253 aa11.86□□□□□ -0.51
PHF3-209ENST00000509330 NBR2O15453 112 aa11.86□□□□□ -0.51
PHF3-209ENST00000509330 MT-CO2P00403 227 aa11.86□□□□□ -0.51
PHF3-209ENST00000509330 RAB5AP20339 215 aa11.86□□□□□ -0.51
PHF3-209ENST00000509330 OR4X1Q8NH49 305 aa11.86□□□□□ -0.51
PHF3-209ENST00000509330 FUT9Q9Y231 359 aa11.86□□□□□ -0.51
PHF3-209ENST00000509330 FBN2P35556 2912 aa11.86□□□□□ -0.51
PHF3-209ENST00000509330 IGKV1D-37A0A075B6S9 117 aa11.86□□□□□ -0.51
PHF3-209ENST00000509330 RPL23P62829 140 aaKnown RBP11.86□□□□□ -0.51
PHF3-209ENST00000509330 FAM120AOSQ5T036 256 aa11.86□□□□□ -0.51
PHF3-209ENST00000509330 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.85□□□□□ -0.51
PHF3-209ENST00000509330 MT-ND4LP03901 98 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 PYYP10082 97 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 PRB4P10163 310 aaPredicted RBP11.85□□□□□ -0.51
PHF3-209ENST00000509330 ZNF114Q8NC26 417 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 NAT8Q9UHE5 227 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 IGHV2-70DA0A0C4DH43 119 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 COX7A2P2O60397 106 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 HABP2Q14520 560 aaPredicted RBP11.85□□□□□ -0.51
PHF3-209ENST00000509330 FXYD3Q14802 87 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 OR1B1Q8NGR6 318 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 RNASEH2CQ8TDP1 164 aaKnown RBP11.85□□□□□ -0.51
PHF3-209ENST00000509330 ZNF503Q96F45 646 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 TBX15Q96SF7 602 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 WNT10AQ9GZT5 417 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 IGHV4-61A0A0C4DH41 118 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 AKR1D1P51857 326 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 ATP5J2P56134 94 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 ELOBQ15370 118 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 LEMD1Q68G75 181 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 C16orf82Q7Z2V1 217 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 CACNG8Q8WXS5 425 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 SIRPDQ9H106 197 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
PHF3-209ENST00000509330 TMEM250H0YL14 139 aa11.84□□□□□ -0.51
PHF3-209ENST00000509330 H3BTX0 84 aa11.84□□□□□ -0.51
PHF3-209ENST00000509330 OVOL3O00110 214 aa11.84□□□□□ -0.51
PHF3-209ENST00000509330 GPX4P36969 197 aaPredicted RBP11.84□□□□□ -0.51
PHF3-209ENST00000509330 ELOVL1Q9BW60 279 aa11.84□□□□□ -0.51
PHF3-209ENST00000509330 OR5AU1Q8NGC0 362 aa11.84□□□□□ -0.51
PHF3-209ENST00000509330 A0A0U1RQK1 487 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 SAA4P35542 130 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 NDPQ00604 133 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 KIR3DL3Q8N743 410 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 ZNF355PQ9NSJ1 428 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 F11RQ9Y624 299 aaKnown RBP11.83□□□□□ -0.52
PHF3-209ENST00000509330 TRBV20OR9-2A0A075B6H5 130 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 TCRBV4S1A1TA0A5B7 111 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 C1orf196B1AJZ1 125 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 FNDC10F2Z333 226 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 IGHV3-23P01764 117 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 PAX2Q02962 417 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 PATE2Q6UY27 113 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 BRD3OSQ6XYD6 125 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 FAM168AQ92567 244 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 ZANQ9Y493 2812 aa11.83□□□□□ -0.52
PHF3-209ENST00000509330 INS-IGF2F8WCM5 200 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 TMEM11P17152 192 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 RPL35P42766 123 aaKnown RBP11.82□□□□□ -0.52
PHF3-209ENST00000509330 PDLIM4P50479 330 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 ASPHD1Q5U4P2 390 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 NANPQ8TBE9 248 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 TECRQ9NZ01 308 aaKnown RBP11.82□□□□□ -0.52
PHF3-209ENST00000509330 CSPG4Q6UVK1 2322 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 ATP5IP56385 69 aaPredicted RBP11.82□□□□□ -0.52
PHF3-209ENST00000509330 UBE2L3P68036 154 aaKnown RBP11.82□□□□□ -0.52
PHF3-209ENST00000509330 FLI1Q01543 452 aaPredicted RBP11.82□□□□□ -0.52
PHF3-209ENST00000509330 PNRC1Q12796 327 aaPredicted RBP11.82□□□□□ -0.52
PHF3-209ENST00000509330 C10orf113Q5VZT2 155 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 OR1P1Q8NH06 330 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 TUBA4BQ9H853 241 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 DNAJC4Q9NNZ3 241 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 IGHV4-30-2A0A087WSY4 118 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 CRYBB3P26998 211 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 COL8A1P27658 744 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 RAB5BP61020 215 aa11.82□□□□□ -0.52
PHF3-209ENST00000509330 SNRPEP62304 92 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms