RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 SRSF6Q13247 344 aaKnown RBP8.21□□□□□ -1.1
PDGFRA-207ENST00000509092 ASPHD1Q5U4P2 390 aa8.21□□□□□ -1.1
PDGFRA-207ENST00000509092 PPP1R32Q7Z5V6 425 aa8.21□□□□□ -1.1
PDGFRA-207ENST00000509092 PHLDA1Q8WV24 401 aaPredicted RBP8.21□□□□□ -1.1
PDGFRA-207ENST00000509092 TNFRSF18Q9Y5U5 241 aa8.21□□□□□ -1.1
PDGFRA-207ENST00000509092 USF3Q68DE3 2245 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 E9PLD3 99 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 ACTL6BO94805 426 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 FKBP2P26885 142 aaKnown RBP8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 BRWD1-AS2P59051 145 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 PRR20EP86478 221 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 PRR20CP86479 221 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 PRR20DP86480 221 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 PRR20BP86481 221 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 PRR20AP86496 221 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 TMEM116Q8NCL8 245 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 ZNF503Q96F45 646 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 ANAPC13Q9BS18 74 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 COL6A3P12111 3177 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 A8MWL6 223 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 MGST3O14880 152 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 CD24P25063 80 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 INSL3P51460 131 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 UBALD1Q8TB05 177 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 C20orf78Q9BR46 151 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 B4GALT7Q9UBV7 327 aa8.2□□□□□ -1.1
PDGFRA-207ENST00000509092 HCFC1P51610 2035 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 ESPL1Q14674 2120 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 ABCA7Q8IZY2 2146 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 CER1O95813 267 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 MT-ATP8P03928 68 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 CELA2BP08218 269 aaPredicted RBP8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 CSN1S1P47710 185 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 ZNF138P52744 262 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 FXYD2P54710 66 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 LGALS9BQ3B8N2 356 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 PRR31Q5SQ13 230 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 LGALS9CQ6DKI2 356 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 ZNF497Q6ZNH5 498 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 ZNF808Q8N4W9 903 aaPredicted RBP8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 HIF1ANQ9NWT6 349 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 TIMM8BQ9Y5J9 83 aaPredicted RBP8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 TET2Q6N021 2002 aaPredicted RBP8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 NKX2-8O15522 239 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 GCSHP23434 173 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 RPL32P62910 135 aaKnown RBP8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 GAGE13Q4V321 117 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 LINC00696Q6ZRV3 163 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 Q6ZUT4 128 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 SYT8Q8NBV8 401 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 PLPPR2Q96GM1 343 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 PRO0461Q9UI25 63 aa8.19□□□□□ -1.1
PDGFRA-207ENST00000509092 A0A1B0GW15 77 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 C5orf49A4QMS7 147 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 B5MCH6 92 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 FNDC10F2Z333 226 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 PATE4P0C8F1 98 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 BCL6BQ8N143 479 aaPredicted RBP8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 ATP6V0E2Q8NHE4 81 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 DDB2Q92466 427 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 TM2D2Q9BX73 214 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 OR2H1Q9GZK4 316 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 C7orf69Q9H7B7 122 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 AP5S1Q9NUS5 200 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 HIGD1BQ9P298 99 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 RALYQ9UKM9 306 aaKnown RBP8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 MED12Q93074 2177 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 SEC16AO15027 2179 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 FAM90A9PA6NNJ1 464 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 H3BMG7 143 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 K7ERJ3 54 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 GFRA3O60609 400 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 CNIH1O95406 144 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 ODF1Q14990 250 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 SMRP1Q8NCR6 262 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 FGFBP3Q8TAT2 258 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 RAX2Q96IS3 184 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 ZNF488Q96MN9 340 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 HSD17B10Q99714 261 aaKnown RBP8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 PRDM14Q9GZV8 571 aa8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 MBNL3Q9NUK0 354 aaKnown RBP8.18□□□□□ -1.1
PDGFRA-207ENST00000509092 CEP192Q8TEP8 1941 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 UNC13CQ8NB66 2214 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 IGHV3-15A0A0B4J1V0 119 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 ZNF716A6NP11 495 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 IGLL5B9A064 214 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 APOMO95445 188 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 ERVK11-1P61568 191 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 YPEL5P62699 121 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 FOXI1Q12951 378 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 Q6P435 159 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 PCP2Q8IVA1 136 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 LINC00479Q96M42 142 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 NABP2Q9BQ15 211 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 UFC1Q9Y3C8 167 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 F11RQ9Y624 299 aaKnown RBP8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 PTPRBP23467 1997 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 TRIOO75962 3097 aa8.17□□□□□ -1.1
PDGFRA-207ENST00000509092 CHEK1O14757 476 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms