RNA–Protein interactions for RNA: ENST00000506147.5

MATR3-235, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-235ENST00000506147 VWC2Q2TAL6 325 aa12.36□□□□□ -0.43
MATR3-235ENST00000506147 LGALSLQ3ZCW2 172 aaPredicted RBP12.36□□□□□ -0.43
MATR3-235ENST00000506147 C19orf35Q6ZS72 473 aa12.36□□□□□ -0.43
MATR3-235ENST00000506147 ZNF329Q86UD4 541 aa12.36□□□□□ -0.43
MATR3-235ENST00000506147 KLHDC1Q8N7A1 406 aa12.36□□□□□ -0.43
MATR3-235ENST00000506147 OR4X2Q8NGF9 303 aa12.36□□□□□ -0.43
MATR3-235ENST00000506147 OR5C1Q8NGR4 320 aa12.36□□□□□ -0.43
MATR3-235ENST00000506147 WFDC12Q8WWY7 111 aa12.36□□□□□ -0.43
MATR3-235ENST00000506147 TXN2Q99757 166 aa12.36□□□□□ -0.43
MATR3-235ENST00000506147 RNF114Q9Y508 228 aa12.36□□□□□ -0.43
MATR3-235ENST00000506147 NDUFB8O95169 186 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 PRH1P02810 166 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 CXCL2P19875 107 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 PROK1P58294 105 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 ZNF266Q14584 549 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 SLC16A13Q7RTY0 426 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 LILRB2Q8N423 598 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 C9orf62Q8N4C0 152 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 TMEM217Q8N7C4 229 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 TMEM116Q8NCL8 245 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 OR5AU1Q8NGC0 362 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 OR4X1Q8NH49 305 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 MYOZ3Q8TDC0 251 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 TMEM147Q9BVK8 224 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 FNDC4Q9H6D8 234 aaPredicted RBP12.35□□□□□ -0.43
MATR3-235ENST00000506147 NPVFQ9HCQ7 196 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 UQCC1Q9NVA1 299 aa12.35□□□□□ -0.43
MATR3-235ENST00000506147 GAR1Q9NY12 217 aaKnown RBP12.35□□□□□ -0.43
MATR3-235ENST00000506147 TRBV7-1A0A0A6YYK4 115 aa12.34□□□□□ -0.43
MATR3-235ENST00000506147 TPPP2P59282 170 aa12.34□□□□□ -0.43
MATR3-235ENST00000506147 C15orf32Q32M92 178 aa12.34□□□□□ -0.43
MATR3-235ENST00000506147 TMUB2Q71RG4 321 aa12.34□□□□□ -0.43
MATR3-235ENST00000506147 SCARB1Q8WTV0 552 aa12.34□□□□□ -0.43
MATR3-235ENST00000506147 EEF1AKMT3Q96AZ1 226 aa12.34□□□□□ -0.43
MATR3-235ENST00000506147 SLC35E1Q96K37 410 aa12.34□□□□□ -0.43
MATR3-235ENST00000506147 MS4A10Q96PG2 267 aa12.34□□□□□ -0.43
MATR3-235ENST00000506147 ATP5SQ99766 215 aa12.34□□□□□ -0.43
MATR3-235ENST00000506147 ARPC5LQ9BPX5 153 aa12.34□□□□□ -0.43
MATR3-235ENST00000506147 PARD6GQ9BYG4 376 aaPredicted RBP12.34□□□□□ -0.43
MATR3-235ENST00000506147 ARL6Q9H0F7 186 aa12.34□□□□□ -0.43
MATR3-235ENST00000506147 FBXL17Q9UF56 701 aa12.34□□□□□ -0.43
MATR3-235ENST00000506147 TGP01266 2768 aa12.33□□□□□ -0.44
MATR3-235ENST00000506147 MEGF8Q7Z7M0 2845 aa12.33□□□□□ -0.44
MATR3-235ENST00000506147 KANTRA0A1W2PQU2 76 aa12.33□□□□□ -0.44
MATR3-235ENST00000506147 NPBWR1P48145 328 aa12.33□□□□□ -0.44
MATR3-235ENST00000506147 MFAP4P55083 255 aa12.33□□□□□ -0.44
MATR3-235ENST00000506147 GAMTQ14353 236 aa12.33□□□□□ -0.44
MATR3-235ENST00000506147 TMEM144Q7Z5S9 345 aa12.33□□□□□ -0.44
MATR3-235ENST00000506147 UBE2E2Q96LR5 201 aa12.33□□□□□ -0.44
MATR3-235ENST00000506147 KLK15Q9H2R5 256 aa12.33□□□□□ -0.44
MATR3-235ENST00000506147 C21orf62Q9NYP8 219 aa12.33□□□□□ -0.44
MATR3-235ENST00000506147 TRAV30A0A087WSZ9 112 aa12.32□□□□□ -0.44
MATR3-235ENST00000506147 BOLA2-SMG1P6H3BVE0 249 aa12.32□□□□□ -0.44
MATR3-235ENST00000506147 BCL2L11O43521 198 aa12.32□□□□□ -0.44
MATR3-235ENST00000506147 MPDU1O75352 247 aa12.32□□□□□ -0.44
MATR3-235ENST00000506147 SCGB2A1O75556 95 aa12.32□□□□□ -0.44
MATR3-235ENST00000506147 JTBO76095 146 aa12.32□□□□□ -0.44
MATR3-235ENST00000506147 IFNA5P01569 189 aa12.32□□□□□ -0.44
MATR3-235ENST00000506147 MDKP21741 143 aaPredicted RBP12.32□□□□□ -0.44
MATR3-235ENST00000506147 SRSF2Q01130 221 aaKnown RBP12.32□□□□□ -0.44
MATR3-235ENST00000506147 KIAA0141Q14154 515 aaPredicted RBP12.32□□□□□ -0.44
MATR3-235ENST00000506147 MLANAQ16655 118 aa12.32□□□□□ -0.44
MATR3-235ENST00000506147 LAMTOR1Q6IAA8 161 aa12.32□□□□□ -0.44
MATR3-235ENST00000506147 ACSM6Q6P461 480 aa12.32□□□□□ -0.44
MATR3-235ENST00000506147 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.32□□□□□ -0.44
MATR3-235ENST00000506147 TAF15Q92804 592 aaKnown RBP eCLIP12.32□□□□□ -0.44
MATR3-235ENST00000506147 BSCL2Q96G97 398 aaPredicted RBP12.32□□□□□ -0.44
MATR3-235ENST00000506147 BORCS7-ASMTA0A0B4J1R7 106 aa12.31□□□□□ -0.44
MATR3-235ENST00000506147 CLN5O75503 358 aa12.31□□□□□ -0.44
MATR3-235ENST00000506147 CDX1P47902 265 aaPredicted RBP12.31□□□□□ -0.44
MATR3-235ENST00000506147 EIF5AP63241 154 aaKnown RBP12.31□□□□□ -0.44
MATR3-235ENST00000506147 CLINT1Q14677 625 aa12.31□□□□□ -0.44
MATR3-235ENST00000506147 C10orf99Q6UWK7 81 aa12.31□□□□□ -0.44
MATR3-235ENST00000506147 ZNF491Q8N8L2 437 aa12.31□□□□□ -0.44
MATR3-235ENST00000506147 THAP8Q8NA92 274 aa12.31□□□□□ -0.44
MATR3-235ENST00000506147 ZNF502Q8TBZ5 544 aa12.31□□□□□ -0.44
MATR3-235ENST00000506147 WDR83OSQ9Y284 106 aa12.31□□□□□ -0.44
MATR3-235ENST00000506147 MFSD2BA6NFX1 497 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 RPLP1P05386 114 aaKnown RBP12.3□□□□□ -0.44
MATR3-235ENST00000506147 RND2P52198 227 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 NKX2-5P52952 324 aaPredicted RBP12.3□□□□□ -0.44
MATR3-235ENST00000506147 AKR1C1Q04828 323 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 RAB31Q13636 194 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 ZNF343Q6P1L6 599 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 TEPPQ6URK8 271 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 TREML4Q6UXN2 200 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 UBAC2Q8NBM4 344 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 NPIPB3Q92617 1050 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 SMIM3Q9BZL3 60 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 WFDC1Q9HC57 220 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 CYTL1Q9NRR1 136 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 LSM4Q9Y4Z0 139 aaKnown RBP12.3□□□□□ -0.44
MATR3-235ENST00000506147 PKD1L1Q8TDX9 2849 aa12.3□□□□□ -0.44
MATR3-235ENST00000506147 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.29□□□□□ -0.44
MATR3-235ENST00000506147 SMCO3A2RU48 225 aa12.29□□□□□ -0.44
MATR3-235ENST00000506147 RUNX1Q01196 453 aa12.29□□□□□ -0.44
MATR3-235ENST00000506147 OPCMLQ14982 345 aa12.29□□□□□ -0.44
MATR3-235ENST00000506147 SPSB3Q6PJ21 355 aa12.29□□□□□ -0.44
MATR3-235ENST00000506147 SLC51BQ86UW2 128 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms