RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 PUS1Q9Y606 427 aaKnown RBP eCLIP14.48□□□□□ -0.09
LINC00535-201ENST00000501400 POLQO75417 2590 aa14.48□□□□□ -0.09
LINC00535-201ENST00000501400 MAP1AP78559 2803 aaPredicted RBP14.47□□□□□ -0.09
LINC00535-201ENST00000501400 PTPN13Q12923 2485 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 PSMB11A5LHX3 300 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 H3BQ15 152 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 CNIH1O95406 144 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 AKR1C3P42330 323 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 PSMB3P49720 205 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 SLC25A33Q9BSK2 321 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 FAM103A1Q9BTL3 118 aaKnown RBP14.47□□□□□ -0.09
LINC00535-201ENST00000501400 C7orf77A4D0Y5 90 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 PAGE4O60829 102 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 TMEM11P17152 192 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 CTRB1P17538 263 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 RHOBP62745 196 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 FXYD3Q14802 87 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 AKIRIN2Q53H80 203 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 CTRB2Q6GPI1 263 aa14.47□□□□□ -0.09
LINC00535-201ENST00000501400 M0R036 132 aa14.46□□□□□ -0.09
LINC00535-201ENST00000501400 TSPAN4O14817 238 aa14.46□□□□□ -0.09
LINC00535-201ENST00000501400 COL8A1P27658 744 aa14.46□□□□□ -0.09
LINC00535-201ENST00000501400 ZNF90Q03938 601 aa14.46□□□□□ -0.09
LINC00535-201ENST00000501400 MIR17HGQ75NE6 70 aa14.46□□□□□ -0.09
LINC00535-201ENST00000501400 IGHV3-21A0A0B4J1V1 117 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 TCRBV4S1A1TA0A5B7 111 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 CORTO00230 105 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 CXorf1O96002 111 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 OR5G3P0C626 314 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 TAGLN2P37802 199 aaKnown RBP14.45□□□□□ -0.1
LINC00535-201ENST00000501400 FAM78BQ5VT40 261 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 ABCA1O95477 2261 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 NCBP2LA6PVI3 153 aaKnown RBP14.45□□□□□ -0.1
LINC00535-201ENST00000501400 MT-CO2P00403 227 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 CX3CL1P78423 397 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 ASPHD1Q5U4P2 390 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 ETFRF1Q6IPR1 90 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 Q8N9W7 124 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 TMEM116Q8NCL8 245 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 TMEM37Q8WXS4 190 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 RPS10P5Q9NQ39 176 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 FUT9Q9Y231 359 aa14.45□□□□□ -0.1
LINC00535-201ENST00000501400 IGHV3OR16-10A0A075B7F0 116 aa14.44□□□□□ -0.1
LINC00535-201ENST00000501400 TRAV40A0A0B4J280 105 aa14.44□□□□□ -0.1
LINC00535-201ENST00000501400 KRTAP10-9P60411 292 aa14.44□□□□□ -0.1
LINC00535-201ENST00000501400 RHEBQ15382 184 aa14.44□□□□□ -0.1
LINC00535-201ENST00000501400 ZNF562Q6V9R5 426 aa14.44□□□□□ -0.1
LINC00535-201ENST00000501400 WNT10AQ9GZT5 417 aa14.44□□□□□ -0.1
LINC00535-201ENST00000501400 ZFHX3Q15911 3703 aa14.44□□□□□ -0.1
LINC00535-201ENST00000501400 TENM4Q6N022 2769 aa14.44□□□□□ -0.1
LINC00535-201ENST00000501400 A0A096LNT2 108 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 I3L2K1 104 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 NDUFS6O75380 124 aaKnown RBP14.43□□□□□ -0.1
LINC00535-201ENST00000501400 MSMBP08118 114 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 GCHFRP30047 84 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 ATP5G3P48201 142 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 DSCR9P59020 149 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 UBE2G2P60604 165 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 ARPC1AQ92747 370 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 NIPSNAP3BQ9BS92 247 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.43□□□□□ -0.1
LINC00535-201ENST00000501400 IGHV1-69DA0A0B4J2H0 117 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 TMEM250H0YL14 139 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 IGHV1-69P01742 117 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 FAM106CPP0CH98 169 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 CLEC12BQ2HXU8 276 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 OR4F5Q8NH21 305 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 ZNF503Q96F45 646 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 OR4F4Q96R69 305 aa14.43□□□□□ -0.1
LINC00535-201ENST00000501400 C11orf94C9JXX5 98 aa14.42□□□□□ -0.1
LINC00535-201ENST00000501400 MORN5Q5VZ52 161 aa14.42□□□□□ -0.1
LINC00535-201ENST00000501400 ABCA12Q86UK0 2595 aa14.42□□□□□ -0.1
LINC00535-201ENST00000501400 IGHV7-81A0A0B4J1V7 117 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 K7EIM0 57 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 NPPCP23582 126 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 BRS3P32247 399 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 BRD3OSQ6XYD6 125 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 TVP23CQ96ET8 276 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 TRGV9Q99603 122 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 C19orf24Q9BVV8 132 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 TNFRSF19Q9NS68 423 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 IGHV4-38-2P0DP08 117 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 EGR2P11161 476 aaPredicted RBP14.41□□□□□ -0.1
LINC00535-201ENST00000501400 SLC25A16P16260 332 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 SELENOTP62341 195 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 KIAA0141Q14154 515 aaPredicted RBP14.41□□□□□ -0.1
LINC00535-201ENST00000501400 PATE2Q6UY27 113 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 GSX1Q9H4S2 264 aaPredicted RBP14.41□□□□□ -0.1
LINC00535-201ENST00000501400 SMCO4Q9NRQ5 59 aa14.41□□□□□ -0.1
LINC00535-201ENST00000501400 YTHDF2Q9Y5A9 579 aaKnown RBP14.41□□□□□ -0.1
LINC00535-201ENST00000501400 NPIPB5A8MRT5 1133 aa14.4□□□□□ -0.1
LINC00535-201ENST00000501400 HLA-DRB1P01911 266 aa14.4□□□□□ -0.1
LINC00535-201ENST00000501400 C22orf15Q8WYQ4 148 aa14.4□□□□□ -0.1
LINC00535-201ENST00000501400 RPUSD4Q96CM3 377 aaKnown RBP14.4□□□□□ -0.1
LINC00535-201ENST00000501400 HSPB9Q9BQS6 159 aa14.4□□□□□ -0.1
LINC00535-201ENST00000501400 PARLQ9H300 379 aa14.4□□□□□ -0.1
LINC00535-201ENST00000501400 DOK5Q9P104 306 aa14.4□□□□□ -0.1
LINC00535-201ENST00000501400 KLF17Q5JT82 389 aaPredicted RBP14.39□□□□□ -0.11
LINC00535-201ENST00000501400 OR51G1Q8NGK1 321 aa14.39□□□□□ -0.11
LINC00535-201ENST00000501400 NANPQ8TBE9 248 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms