RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 CDK10Q15131 360 aa9.7□□□□□ -0.86
RNF220-218ENST00000497469 ZNF705AQ6ZN79 300 aaPredicted RBP9.7□□□□□ -0.86
RNF220-218ENST00000497469 MMD2Q8IY49 270 aa9.7□□□□□ -0.86
RNF220-218ENST00000497469 OSR1Q8TAX0 266 aaPredicted RBP9.7□□□□□ -0.86
RNF220-218ENST00000497469 SECTM1Q8WVN6 248 aa9.7□□□□□ -0.86
RNF220-218ENST00000497469 S100A16Q96FQ6 103 aaKnown RBP9.7□□□□□ -0.86
RNF220-218ENST00000497469 CCL28Q9NRJ3 127 aa9.7□□□□□ -0.86
RNF220-218ENST00000497469 TAS2R8Q9NYW2 309 aa9.7□□□□□ -0.86
RNF220-218ENST00000497469 PUS1Q9Y606 427 aaKnown RBP eCLIP9.7□□□□□ -0.86
RNF220-218ENST00000497469 ZNF705FA8MVS1 300 aaPredicted RBP9.69□□□□□ -0.86
RNF220-218ENST00000497469 TNFSF12O43508 249 aa9.69□□□□□ -0.86
RNF220-218ENST00000497469 SLC22A5O76082 557 aa9.69□□□□□ -0.86
RNF220-218ENST00000497469 ZNF705DP0CH99 300 aaPredicted RBP9.69□□□□□ -0.86
RNF220-218ENST00000497469 ZNF705BP0CI00 300 aaPredicted RBP9.69□□□□□ -0.86
RNF220-218ENST00000497469 CBX5P45973 191 aa9.69□□□□□ -0.86
RNF220-218ENST00000497469 VKORC1L1Q8N0U8 176 aa9.69□□□□□ -0.86
RNF220-218ENST00000497469 OR5AP2Q8NGF4 316 aa9.69□□□□□ -0.86
RNF220-218ENST00000497469 TCTEX1D2Q8WW35 142 aa9.69□□□□□ -0.86
RNF220-218ENST00000497469 NEU1Q99519 415 aa9.69□□□□□ -0.86
RNF220-218ENST00000497469 DCUN1D5Q9BTE7 237 aa9.69□□□□□ -0.86
RNF220-218ENST00000497469 IFT46Q9NQC8 304 aa9.69□□□□□ -0.86
RNF220-218ENST00000497469 COMMD3Q9UBI1 195 aa9.69□□□□□ -0.86
RNF220-218ENST00000497469 ANAPC10Q9UM13 185 aa9.69□□□□□ -0.86
RNF220-218ENST00000497469 PRELID3BQ9Y3B1 194 aa9.69□□□□□ -0.86
RNF220-218ENST00000497469 GABARAPO95166 117 aa9.68□□□□□ -0.86
RNF220-218ENST00000497469 FXYD4P59646 89 aa9.68□□□□□ -0.86
RNF220-218ENST00000497469 CTF1Q16619 201 aa9.68□□□□□ -0.86
RNF220-218ENST00000497469 KLK9Q2XQG4 91 aa9.68□□□□□ -0.86
RNF220-218ENST00000497469 UBAC2Q8NBM4 344 aa9.68□□□□□ -0.86
RNF220-218ENST00000497469 ST8SIA2Q92186 375 aa9.68□□□□□ -0.86
RNF220-218ENST00000497469 HSD17B10Q99714 261 aaKnown RBP9.68□□□□□ -0.86
RNF220-218ENST00000497469 KLK9Q9UKQ9 250 aa9.68□□□□□ -0.86
RNF220-218ENST00000497469 MRPS7Q9Y2R9 242 aaKnown RBP9.68□□□□□ -0.86
RNF220-218ENST00000497469 ST8SIA3O43173 380 aa9.67□□□□□ -0.86
RNF220-218ENST00000497469 CREBL2O60519 120 aaPredicted RBP9.67□□□□□ -0.86
RNF220-218ENST00000497469 YIF1AO95070 293 aa9.67□□□□□ -0.86
RNF220-218ENST00000497469 APOHP02749 345 aaPredicted RBP9.67□□□□□ -0.86
RNF220-218ENST00000497469 PTBP1P26599 531 aaKnown RBP eCLIP9.67□□□□□ -0.86
RNF220-218ENST00000497469 RFX2P48378 723 aa9.67□□□□□ -0.86
RNF220-218ENST00000497469 ZNF818PQ6ZRF7 136 aa9.67□□□□□ -0.86
RNF220-218ENST00000497469 TMEM17Q86X19 198 aa9.67□□□□□ -0.86
RNF220-218ENST00000497469 OR4S2Q8NH73 311 aa9.67□□□□□ -0.86
RNF220-218ENST00000497469 BSCL2Q96G97 398 aaPredicted RBP9.67□□□□□ -0.86
RNF220-218ENST00000497469 SLC5A7Q9GZV3 580 aa9.67□□□□□ -0.86
RNF220-218ENST00000497469 EHFQ9NZC4 300 aa9.67□□□□□ -0.86
RNF220-218ENST00000497469 HPGDSO60760 199 aa9.66□□□□□ -0.86
RNF220-218ENST00000497469 KBTBD11O94819 623 aa9.66□□□□□ -0.86
RNF220-218ENST00000497469 APOA1P02647 267 aa9.66□□□□□ -0.86
RNF220-218ENST00000497469 PMP2P02689 132 aa9.66□□□□□ -0.86
RNF220-218ENST00000497469 ZNF735P0CB33 412 aa9.66□□□□□ -0.86
RNF220-218ENST00000497469 NAT1P18440 290 aa9.66□□□□□ -0.86
RNF220-218ENST00000497469 ELK1P19419 428 aa9.66□□□□□ -0.86
RNF220-218ENST00000497469 PRSS3P35030 304 aa9.66□□□□□ -0.86
RNF220-218ENST00000497469 FXYD7P58549 80 aa9.66□□□□□ -0.86
RNF220-218ENST00000497469 MSMO1Q15800 293 aa9.66□□□□□ -0.86
RNF220-218ENST00000497469 GPR107Q5VW38 600 aa9.66□□□□□ -0.86
RNF220-218ENST00000497469 C1QTNF4Q9BXJ3 329 aa9.66□□□□□ -0.86
RNF220-218ENST00000497469 MRPS26Q9BYN8 205 aaKnown RBP9.66□□□□□ -0.86
RNF220-218ENST00000497469 LOC102723971A0A1B0GUV8 181 aa9.65□□□□□ -0.86
RNF220-218ENST00000497469 SULT1C2O00338 296 aa9.65□□□□□ -0.86
RNF220-218ENST00000497469 ALDH3B2P48448 385 aa9.65□□□□□ -0.86
RNF220-218ENST00000497469 RORCP51449 518 aa9.65□□□□□ -0.86
RNF220-218ENST00000497469 ODF1Q14990 250 aa9.65□□□□□ -0.86
RNF220-218ENST00000497469 SNX29P2Q8IUI4 249 aa9.65□□□□□ -0.86
RNF220-218ENST00000497469 LYSMD2Q8IV50 215 aa9.65□□□□□ -0.86
RNF220-218ENST00000497469 SPAG16Q8N0X2 631 aa9.65□□□□□ -0.86
RNF220-218ENST00000497469 PUSL1Q8N0Z8 303 aaKnown RBP9.65□□□□□ -0.86
RNF220-218ENST00000497469 STXBP6Q8NFX7 210 aa9.65□□□□□ -0.86
RNF220-218ENST00000497469 OR51H1Q8NH63 302 aa9.65□□□□□ -0.86
RNF220-218ENST00000497469 GPX8Q8TED1 209 aa9.65□□□□□ -0.86
RNF220-218ENST00000497469 UPK3BQ9BT76 320 aa9.65□□□□□ -0.86
RNF220-218ENST00000497469 TRAV14DV4A0A0A6YYC5 116 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 SMIM9A6NGZ8 99 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 HLA-DMAP28067 261 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 GNRHRP30968 328 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 HRH1P35367 487 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 HNRNPA3P51991 378 aaKnown RBP9.64□□□□□ -0.87
RNF220-218ENST00000497469 TAS2R46P59540 309 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 HERV-K104P61576 105 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 DHRS11Q6UWP2 260 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 ZBTB34Q8NCN2 500 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 OR5H2Q8NGV7 314 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 TMEM167AQ8TBQ9 72 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 MOB3AQ96BX8 217 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 ZNF2Q9BSG1 426 aaPredicted RBP9.64□□□□□ -0.87
RNF220-218ENST00000497469 FXYD6Q9H0Q3 95 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 CRCT1Q9UGL9 99 aa9.64□□□□□ -0.87
RNF220-218ENST00000497469 CGB1A6NKQ9 187 aa9.63□□□□□ -0.87
RNF220-218ENST00000497469 K7EQG2 157 aa9.63□□□□□ -0.87
RNF220-218ENST00000497469 DEFB130BP0DP73 79 aa9.63□□□□□ -0.87
RNF220-218ENST00000497469 DEFB130AP0DP74 79 aa9.63□□□□□ -0.87
RNF220-218ENST00000497469 CATR1Q13166 79 aa9.63□□□□□ -0.87
RNF220-218ENST00000497469 ESRGQ1W209 222 aa9.63□□□□□ -0.87
RNF220-218ENST00000497469 SPSB3Q6PJ21 355 aa9.63□□□□□ -0.87
RNF220-218ENST00000497469 VSTM2AQ8TAG5 236 aa9.63□□□□□ -0.87
RNF220-218ENST00000497469 RAB40CQ96S21 281 aa9.63□□□□□ -0.87
RNF220-218ENST00000497469 MAGT1Q9H0U3 335 aa9.63□□□□□ -0.87
RNF220-218ENST00000497469 FSIP2Q5CZC0 6907 aa9.63□□□□□ -0.87
RNF220-218ENST00000497469 TRAV2A0A0B4J234 112 aa9.62□□□□□ -0.87
RNF220-218ENST00000497469 SMIM31A0A1B0GVY4 71 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms