RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 FAM231AP0DMU4 169 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 FAM231CP0DMU5 169 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 CRYGAP11844 174 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 MDKP21741 143 aaPredicted RBP2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 HOXA4Q00056 320 aaPredicted RBP2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 DAZ2Q13117 558 aaKnown RBP2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 SP6Q3SY56 376 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 Q56UQ5 140 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF506Q5JVG8 444 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 FHL5Q5TD97 284 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 HES3Q5TGS1 186 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 FRG2Q64ET8 278 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 C9orf139Q6ZV77 190 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 AAED1Q7RTV5 226 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 SH2D6Q7Z4S9 175 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 SPATA12Q7Z6I5 190 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 DAZ4Q86SG3 579 aaKnown RBP2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 C3orf56Q8N813 242 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 CYB561D1Q8N8Q1 229 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 DCAF4L2Q8NA75 395 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 OR9G1Q8NH87 305 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 FAM213BQ8TBF2 198 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 DCTN5Q9BTE1 182 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 POLR2J2Q9GZM3 115 aaKnown RBP2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 DAZ1Q9NQZ3 744 aaKnown RBP2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 DAZ3Q9NR90 486 aaKnown RBP2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 PCTPQ9UKL6 214 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 NUP205Q92621 2012 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 BRWD3Q6RI45 1802 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 STRCP1A6NGW2 1772 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 MRC1P22897 1456 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 SAA2-SAA4A0A096LPE2 208 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 TMEM272A0A1B0GTI8 110 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 LOC107986453A0A1B0GWG9 222 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 KNCNA6PVL3 124 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 NEURL1O76050 574 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 WISP2O76076 250 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 NXPH3O95157 252 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF688P0C7X2 276 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 CD59P13987 128 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 IGLL1P15814 213 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 CRYGSP22914 178 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 GATA2P23769 480 aaPredicted RBP2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 PRSS3P35030 304 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 CFHR3Q02985 330 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 FUT5Q11128 374 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF322Q6U7Q0 402 aaPredicted RBP2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 TMEM255BQ8WV15 326 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 C18orf15Q96N68 181 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 PLA2G2FQ9BZM2 168 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 VSIG4Q9Y279 399 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 TRAPPC1Q9Y5R8 145 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 NRXN3Q9Y4C0 1643 aa2.47□□□□□ -2.01
SNRNP48-202ENST00000496946 DOCK5Q9H7D0 1870 aa2.46□□□□□ -2.01
SNRNP48-202ENST00000496946 MED19A0JLT2 244 aaPredicted RBP2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 FXYD1O00168 92 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 NUPR1O60356 82 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 IGHG2P01859 326 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 PYYP10082 97 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 CBLN1P23435 193 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 PPICP45877 212 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 DAPP51397 102 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 CYCSP99999 105 aaKnown RBP2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 ARL16Q0P5N6 197 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 RTL8BQ17RB0 113 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 NMSQ5H8A3 153 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 Q6ZRU5 148 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 ZNF114Q8NC26 417 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 OR2T10Q8NGZ9 312 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 MRPL30Q8TCC3 161 aaKnown RBP2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 BRK1Q8WUW1 75 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 PPP1R1CQ8WVI7 109 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 GEMIN6Q8WXD5 167 aaKnown RBP2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 AQP3Q92482 292 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 IGF2BP2-AS1Q96M15 143 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 RTL8AQ9BWD3 113 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 SPRY4Q9C004 299 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 OTORQ9NRC9 128 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 PXMP4Q9Y6I8 212 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 ZFC3H1O60293 1989 aaKnown RBP2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 HELZP42694 1942 aaKnown RBP2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 TRAV4A0A0B4J268 109 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 MRPS12O15235 138 aaKnown RBP2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 HCRTO43612 131 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 SERF1AO75920 110 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 JTBO76095 146 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 IGKV1D-16P01601 117 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 HLA-DPB1P04440 258 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 FGF1P05230 155 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 CTLA4P16410 223 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 SAA4P35542 130 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 INSL3P51460 131 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 SUB1P53999 127 aaKnown RBP eCLIP2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 GFERP55789 205 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 FKBP1AP62942 108 aaKnown RBP2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 MRPL2Q5T653 305 aaKnown RBP2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 ZNF793Q6ZN11 406 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 BAGE3Q86Y29 109 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 BAGE2Q86Y30 109 aa2.46□□□□□ -2.02
SNRNP48-202ENST00000496946 BPIFA4PQ86YQ2 179 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms