RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 NIT2Q9NQR4 276 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 ZNF355PQ9NSJ1 428 aa4.58□□□□□ -1.68
SNX13-210ENST00000494402 PRG4Q92954 1404 aaPredicted RBP4.57□□□□□ -1.68
SNX13-210ENST00000494402 DSCAML1Q8TD84 2053 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 A0A087X0T9 212 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 ODAMA1E959 279 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 GGT3PA6NGU5 568 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 GGTLC3B5MD39 225 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 NPFFO15130 113 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 SLC25A20O43772 301 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 SH2D1AO60880 128 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 FGF7P21781 194 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 FXYD7P58549 80 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 AKR1C1Q04828 323 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 C10orf91Q5T1B1 145 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 MIR7-3HGQ8N6C7 128 aa4.57□□□□□ -1.68
SNX13-210ENST00000494402 AHDC1Q5TGY3 1603 aaPredicted RBP4.57□□□□□ -1.68
SNX13-210ENST00000494402 PRDM2Q13029 1718 aa4.56□□□□□ -1.68
SNX13-210ENST00000494402 UBFD1O14562 309 aaKnown RBP4.56□□□□□ -1.68
SNX13-210ENST00000494402 IGKV1D-33P01593 117 aa4.56□□□□□ -1.68
SNX13-210ENST00000494402 IGKV1-33P01594 117 aa4.56□□□□□ -1.68
SNX13-210ENST00000494402 TRGV3P03979 118 aa4.56□□□□□ -1.68
SNX13-210ENST00000494402 SLC25A16P16260 332 aa4.56□□□□□ -1.68
SNX13-210ENST00000494402 RPL22P35268 128 aaKnown RBP4.56□□□□□ -1.68
SNX13-210ENST00000494402 RPL35P42766 123 aaKnown RBP4.56□□□□□ -1.68
SNX13-210ENST00000494402 GLIPR1L1Q6UWM5 242 aa4.56□□□□□ -1.68
SNX13-210ENST00000494402 C16orf47Q6ZP98 133 aaPredicted RBP4.56□□□□□ -1.68
SNX13-210ENST00000494402 C18orf65Q6ZTR6 163 aa4.56□□□□□ -1.68
SNX13-210ENST00000494402 ZNF767PQ75MW2 155 aa4.56□□□□□ -1.68
SNX13-210ENST00000494402 RBMXL1Q96E39 390 aaKnown RBP4.56□□□□□ -1.68
SNX13-210ENST00000494402 ZC2HC1AQ96GY0 325 aa4.56□□□□□ -1.68
SNX13-210ENST00000494402 TRAPPC1Q9Y5R8 145 aa4.56□□□□□ -1.68
SNX13-210ENST00000494402 OTOFQ9HC10 1997 aa4.56□□□□□ -1.68
SNX13-210ENST00000494402 LRP4O75096 1905 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 TRBV24-1A0A075B6N3 115 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 TRAV13-1A0A0B4J241 112 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 H3BMG7 143 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 APODP05090 189 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 CCL3P10147 92 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 GUCA1AP43080 201 aaPredicted RBP4.55□□□□□ -1.68
SNX13-210ENST00000494402 RAB5CP51148 216 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 RBM11P57052 281 aaKnown RBP4.55□□□□□ -1.68
SNX13-210ENST00000494402 GNB2P62879 340 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 HBBP68871 147 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 ZNF141Q15928 474 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 ZNF181Q2M3W8 571 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 PHF5AQ7RTV0 110 aaKnown RBP4.55□□□□□ -1.68
SNX13-210ENST00000494402 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 C11orf42Q8N5U0 333 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 TERB2Q8NHR7 220 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 ADAT1Q9BUB4 502 aaKnown RBP4.55□□□□□ -1.68
SNX13-210ENST00000494402 MRPL32Q9BYC8 188 aaKnown RBP4.55□□□□□ -1.68
SNX13-210ENST00000494402 CST9LQ9H4G1 147 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 LHX9Q9NQ69 397 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 NUP210Q8TEM1 1887 aaPredicted RBP4.55□□□□□ -1.68
SNX13-210ENST00000494402 ATAD5Q96QE3 1844 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 PTPRTO14522 1441 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 SPATA31E1Q6ZUB1 1445 aa4.55□□□□□ -1.68
SNX13-210ENST00000494402 IGLV1-47P01700 117 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 CXCL1P09341 107 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 ZNF728P0DKX0 622 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 HLA-EP13747 358 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 DYNLT3P51808 116 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 RHOGP84095 191 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 C3orf22Q8N5N4 141 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 WFDC5Q8TCV5 224 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 UPK3BQ9BT76 320 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 OSTCQ9NRP0 149 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 ZFP30Q9Y2G7 519 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 SOX21Q9Y651 276 aaPredicted RBP4.54□□□□□ -1.68
SNX13-210ENST00000494402 CRB1P82279 1406 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 TNS2Q63HR2 1409 aa4.54□□□□□ -1.68
SNX13-210ENST00000494402 TMEM2Q9UHN6 1383 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 UBR2Q8IWV8 1755 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 IGKV1-9A0A0C4DH69 117 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 GRIFINA4D1Z8 144 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 H3BMM0 161 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 LECT2O14960 151 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 IGHV1-69P01742 117 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 MUC1P15941 1255 aaPredicted RBP4.53□□□□□ -1.68
SNX13-210ENST00000494402 CRHBPP24387 322 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 HLA-DMBP28068 263 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 ZNF322Q6U7Q0 402 aaPredicted RBP4.53□□□□□ -1.68
SNX13-210ENST00000494402 BPIFA4PQ86YQ2 179 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 C8orf59Q8N0T1 100 aaPredicted RBP4.53□□□□□ -1.68
SNX13-210ENST00000494402 LYG1Q8N1E2 194 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 HIST3H2BBQ8N257 126 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 TEX29Q8N6K0 151 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 ACBD7Q8N6N7 88 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 OR5A2Q8NGI9 324 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 UBE2WQ96B02 151 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 PLA2G2FQ9BZM2 168 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 SCN3BQ9NY72 215 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 MARCOQ9UEW3 520 aaPredicted RBP4.53□□□□□ -1.68
SNX13-210ENST00000494402 NLRC5Q86WI3 1866 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 NAIPQ13075 1403 aa4.53□□□□□ -1.68
SNX13-210ENST00000494402 NCAPD3P42695 1498 aa4.52□□□□□ -1.69
SNX13-210ENST00000494402 GRIN2AQ12879 1464 aa4.52□□□□□ -1.69
SNX13-210ENST00000494402 TCOF1Q13428 1488 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms