RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 IGHV3-21A0A0B4J1V1 117 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 MFSD2BA6NFX1 497 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 FAM223BA6NKX1 122 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 JTBO76095 146 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 IFNA5P01569 189 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 IGHV3-48P01763 117 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 TRGV3P03979 118 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 PF4V1P10720 104 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 PSMB8P28062 276 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 SRSF2Q01130 221 aaKnown RBP8.89□□□□□ -0.99
MCF2L-231ENST00000494043 AKR1C1Q04828 323 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 TREML4Q6UXN2 200 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 SLC51BQ86UW2 128 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 FAM223AQ8IWN6 122 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 UBAC2Q8NBM4 344 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 STOML3Q8TAV4 291 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 VN1R17PQ8TDU5 208 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 PARD6GQ9BYG4 376 aaPredicted RBP8.89□□□□□ -0.99
MCF2L-231ENST00000494043 SLA2Q9H6Q3 261 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 MRPL36Q9P0J6 103 aaKnown RBP8.89□□□□□ -0.99
MCF2L-231ENST00000494043 WDR83OSQ9Y284 106 aa8.89□□□□□ -0.99
MCF2L-231ENST00000494043 MDKP21741 143 aaPredicted RBP8.88□□□□□ -0.99
MCF2L-231ENST00000494043 FGF7P21781 194 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 RND2P52198 227 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 TPPP2P59282 170 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 FOXE3Q13461 319 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 C15orf32Q32M92 178 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 ACSM6Q6P461 480 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 TEX38Q6PEX7 206 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 C10orf99Q6UWK7 81 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 TMEM144Q7Z5S9 345 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 CENPVQ7Z7K6 275 aaPredicted RBP8.88□□□□□ -0.99
MCF2L-231ENST00000494043 TMEM116Q8NCL8 245 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 OR4F5Q8NH21 305 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 LINC01006Q8NI28 216 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 SCARB1Q8WTV0 552 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 ACY3Q96HD9 319 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 WDR61Q9GZS3 305 aaKnown RBP8.88□□□□□ -0.99
MCF2L-231ENST00000494043 ARV1Q9H2C2 271 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 KLK15Q9H2R5 256 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 NPVFQ9HCQ7 196 aa8.88□□□□□ -0.99
MCF2L-231ENST00000494043 ELANEP08246 267 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 TPT1P13693 172 aaKnown RBP8.87□□□□□ -0.99
MCF2L-231ENST00000494043 RAB9AP51151 201 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 MFAP4P55083 255 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 EIF5AP63241 154 aaKnown RBP8.87□□□□□ -0.99
MCF2L-231ENST00000494043 ATP5G2Q06055 141 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 TEPPQ6URK8 271 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 BTNL8Q6UX41 500 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 LCNL1Q6ZST4 164 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 COMMD1Q8N668 190 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 RNF152Q8N8N0 203 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 THAP8Q8NA92 274 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 HSD17B11Q8NBQ5 300 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 OR4X1Q8NH49 305 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 ZNF502Q8TBZ5 544 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 SCGB1C1Q8TD33 95 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 WIPF2Q8TF74 440 aaPredicted RBP8.87□□□□□ -0.99
MCF2L-231ENST00000494043 ST8SIA2Q92186 375 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 NPIPB3Q92617 1050 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 EEF1AKMT3Q96AZ1 226 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 USMG5Q96IX5 58 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 CXorf58Q96LI9 332 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 GINS3Q9BRX5 216 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 C21orf62Q9NYP8 219 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 LSM4Q9Y4Z0 139 aaKnown RBP8.87□□□□□ -0.99
MCF2L-231ENST00000494043 S4R3C0 116 aa8.87□□□□□ -0.99
MCF2L-231ENST00000494043 IGKV1OR2-108A0A075B7D4 117 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 A0A0G2JLM5 398 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 MPDU1O75352 247 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 CLN5O75503 358 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 IGHV3-23P01764 117 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 FCGR2BP31994 310 aaPredicted RBP8.86□□□□□ -0.99
MCF2L-231ENST00000494043 NPBWR1P48145 328 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 RUNX1Q01196 453 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 BAP18Q8IXM2 172 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 KLHDC1Q8N7A1 406 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 MYOZ3Q8TDC0 251 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 MGST2Q99735 147 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 TXN2Q99757 166 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 C2CD3Q4AC94 2353 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 JMJD1CQ15652 2540 aa8.86□□□□□ -0.99
MCF2L-231ENST00000494043 IGKV1D-37A0A075B6S9 117 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 TRBV7-1A0A0A6YYK4 115 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 CLPSL1A2RUU4 121 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 ZFP92A6NM28 416 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 F8W735 103 aaPredicted RBP8.85□□□□□ -0.99
MCF2L-231ENST00000494043 RPLP1P05386 114 aaKnown RBP8.85□□□□□ -0.99
MCF2L-231ENST00000494043 ATP6V0CP27449 155 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 OR10J1P30954 320 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 KIAA0141Q14154 515 aaPredicted RBP8.85□□□□□ -0.99
MCF2L-231ENST00000494043 Q56UQ5 140 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 OR5AU1Q8NGC0 362 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 GNPNAT1Q96EK6 184 aaPredicted RBP8.85□□□□□ -0.99
MCF2L-231ENST00000494043 CCDC140Q96MF4 163 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 ATP6V0BQ99437 205 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 RSG1Q9BU20 258 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 GGTLC1Q9BX51 225 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 NPCDR1Q9BY65 106 aa8.85□□□□□ -0.99
MCF2L-231ENST00000494043 SH3BGRL3Q9H299 93 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms