RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 TIMM23BQ5SRD1 257 aa17.47■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 ZNF841Q6ZN19 808 aa17.47■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 CHCHD1Q96BP2 118 aaKnown RBP17.47■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 SS18L1O75177 396 aaPredicted RBP17.46■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 NUDT10Q8NFP7 164 aa17.46■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 NUDT11Q96G61 164 aa17.46■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 IGKV1-39P01597 117 aa17.46■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 IGKV1D-39P04432 117 aa17.46■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 RPL13AP40429 203 aaKnown RBP17.46■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 MFAP4P55083 255 aa17.46■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 Q6AWC8 147 aa17.46■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 UNQ5815/PRO19632Q6UWF5 114 aa17.46■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 LRRK1Q38SD2 2015 aa17.46■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 PSMB2P49721 201 aa17.46■□□□□ 0.39
CHKB-CPT1B-203ENST00000492556 TCRBV4S1A1TA0A5B7 111 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 GFRA3O60609 400 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 CCDC144NLQ6NUI1 221 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 TMEM238LA0A1B0GVL6 79 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 A6NJY4 79 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 IGKV1D-33P01593 117 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 IGKV1-33P01594 117 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 SSC4DQ8WTU2 575 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 HIST1H4GQ99525 98 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 CD40P25942 277 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 ZNF788Q6ZQV5 615 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 MBNL3Q9NUK0 354 aaKnown RBP17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 MRPL27Q9P0M9 148 aaKnown RBP17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 ZNF257Q9Y2Q1 563 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 LINC00312Q9Y6C7 94 aa17.45■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 C7orf71A4D174 169 aa17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 FAM90A27PA6NNH2 459 aa17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 TRAV3A0A0B4J244 114 aa17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 ANOS1P23352 680 aa17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 NTN3O00634 580 aaPredicted RBP17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 IL18BPO95998 194 aa17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 IL4P05112 153 aa17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 MGPP08493 103 aa17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 HIST1H1AQ02539 215 aaPredicted RBP17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 RELQ04864 619 aaPredicted RBP17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 MEF2CQ06413 473 aaPredicted RBP17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 LDLRAD2Q5SZI1 272 aa17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 TMEM78Q5T7P6 136 aa17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 ORAOV1Q8WV07 137 aa17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 TRAV5A0A0B4J249 113 aa17.44■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 TEX45Q8NA69 505 aa17.43■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 HILPDAQ9Y5L2 63 aa17.43■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 J3KRW8 73 aa17.43■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 LCN12Q6JVE5 192 aa17.43■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 COQ2Q96H96 371 aa17.43■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 OTORQ9NRC9 128 aa17.43■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 C2orf83Q53S99 150 aa17.43■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 MBNL2Q5VZF2 373 aaKnown RBP17.43■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 HAPLN4Q86UW8 402 aa17.43■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 CDKN1AP38936 164 aa17.43■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 YPEL3P61236 119 aaPredicted RBP17.42■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.42■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 TSPOP30536 169 aa17.42■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 LINC00205P59089 165 aa17.42■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 UBE2V1Q13404 147 aa17.42■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 CIARTQ8N365 385 aaPredicted RBP17.42■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 PSMG4Q5JS54 123 aa17.41■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 SPCS1Q9Y6A9 102 aa17.41■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 ATRXP46100 2492 aa17.41■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 SRRM5B3KS81 715 aa17.41■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 Q0VFX4 171 aa17.41■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 CLEC7AQ9BXN2 247 aa17.41■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 KIAA2026Q5HYC2 2103 aa17.41■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 ESPL1Q14674 2120 aa17.41■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 METRNQ9UJH8 293 aa17.41■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 SPAARA0A1B0GVQ0 90 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 SFTPCP11686 197 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 ORMDL3Q8N138 153 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 ARL6IP6Q8N6S5 226 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 C9orf106Q8NAJ2 232 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 MS4A6AQ9H2W1 248 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 CRIM1Q9NZV1 1036 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 H3BUT2 72 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 ECSCRQ19T08 205 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 RABAC1Q9UI14 185 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 H3BVH4 76 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 CD177Q8N6Q3 437 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 C18orf15Q96N68 181 aa17.4■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 A0A1W2PS18 150 aa17.39■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 FBXL7Q9UJT9 491 aa17.39■□□□□ 0.38
CHKB-CPT1B-203ENST00000492556 Q6ZWC4 215 aa17.39■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 FDCSPQ8NFU4 85 aa17.39■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 ZNF502Q8TBZ5 544 aa17.39■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 OR10W1Q8NGF6 305 aa17.39■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 COA6Q5JTJ3 125 aaKnown RBP17.39■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 SPRR3Q9UBC9 169 aa17.39■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 LOC107984156A0A0G2JMH3 177 aa17.38■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 IGHV1-69-2A0A0G2JMI3 117 aa17.38■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 ARL17AQ8IVW1 177 aa17.38■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 NUP35Q8NFH5 326 aa17.38■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 ZNF71Q9NQZ8 489 aaPredicted RBP17.38■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 PPIAL4CA0A0B4J2A2 164 aa17.38■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 PPIAL4GP0DN37 164 aa17.38■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 C5orf30Q96GV9 206 aa17.38■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 CYYR1Q96J86 154 aa17.38■□□□□ 0.37
CHKB-CPT1B-203ENST00000492556 LOXL4Q96JB6 756 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms