RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 RPL27AP46776 148 aaKnown RBP9.33□□□□□ -0.92
TRIM40-208ENST00000489892 SUB1P53999 127 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRIM40-208ENST00000489892 C5orf64Q2M2E5 130 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 AKIRIN2Q53H80 203 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 SPANXN5Q5MJ07 72 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 RUSC1-AS1Q66K80 236 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 BRD3OSQ6XYD6 125 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 PRIMA1Q86XR5 153 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 OR10P1Q8NGE3 313 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 OR5R1Q8NH85 324 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 AJUBAQ96IF1 538 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 GGACTQ9BVM4 153 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 CTDSP1Q9GZU7 261 aa9.33□□□□□ -0.92
TRIM40-208ENST00000489892 SONP18583 2426 aaKnown RBP9.33□□□□□ -0.92
TRIM40-208ENST00000489892 IGHV3OR16-10A0A075B7F0 116 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 TRAV3A0A0B4J244 114 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 A0A0U1RQK1 487 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 MAP1LC3B2A6NCE7 125 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 C5orf52A6NGY3 159 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 ZNF98A6NK75 572 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 NCBP2LA6PVI3 153 aaKnown RBP9.32□□□□□ -0.92
TRIM40-208ENST00000489892 TMEM250H0YL14 139 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 CYB5BO43169 146 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 CNIH1O95406 144 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 IFNA10P01566 189 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 AKR1D1P51857 326 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 TNXAQ16473 311 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 HAGHQ16775 308 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 KLF17Q5JT82 389 aaPredicted RBP9.32□□□□□ -0.92
TRIM40-208ENST00000489892 DYNAPQ8N1N2 210 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 SLC24A4Q8NFF2 622 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 RCC1LQ96I51 464 aaKnown RBP9.32□□□□□ -0.92
TRIM40-208ENST00000489892 YPEL4Q96NS1 127 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 RASL11BQ9BPW5 248 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 HINT2Q9BX68 163 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 MAP1LC3BQ9GZQ8 125 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 NDUFA4L2Q9NRX3 87 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 MOB4Q9Y3A3 225 aa9.32□□□□□ -0.92
TRIM40-208ENST00000489892 PUS1Q9Y606 427 aaKnown RBP eCLIP9.32□□□□□ -0.92
TRIM40-208ENST00000489892 TET2Q6N021 2002 aaPredicted RBP9.32□□□□□ -0.92
TRIM40-208ENST00000489892 TNCP24821 2201 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 TEX50A0A1B0GTY4 177 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 UBE2L5PA0A1B0GUS4 154 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 NPY1RP25929 384 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 VDAC2P45880 294 aaPredicted RBP9.31□□□□□ -0.92
TRIM40-208ENST00000489892 MEOX2P50222 304 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 CCL20P78556 96 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 HNF4GQ14541 408 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 HAPLN4Q86UW8 402 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 CYB561D1Q8N8Q1 229 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 ZNF709Q8N972 641 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 OR1L6Q8NGR2 347 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 ZDHHC16Q969W1 377 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 OR4C12Q96R67 309 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 SSX3Q99909 188 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 RARRES2Q99969 163 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 TXNDC17Q9BRA2 123 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 RSG1Q9BU20 258 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 ACTR3CQ9C0K3 210 aaPredicted RBP9.31□□□□□ -0.92
TRIM40-208ENST00000489892 FBXL15Q9H469 300 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 RPRMQ9NS64 109 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 TMEM160Q9NX00 188 aa9.31□□□□□ -0.92
TRIM40-208ENST00000489892 SMCO3A2RU48 225 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 AP4M1O00189 453 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 CORTO00230 105 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 AVPP01185 164 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 HLA-DRB1P01911 266 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 SRP14P37108 136 aaKnown RBP9.3□□□□□ -0.92
TRIM40-208ENST00000489892 RPL35P42766 123 aaKnown RBP9.3□□□□□ -0.92
TRIM40-208ENST00000489892 PSMB3P49720 205 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 RND2P52198 227 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 GNB1P62873 340 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 DLK1P80370 383 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 ACOT6Q3I5F7 207 aaPredicted RBP9.3□□□□□ -0.92
TRIM40-208ENST00000489892 FAM90A2PQ658T7 463 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 ZNF562Q6V9R5 426 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 CIARTQ8N365 385 aaPredicted RBP9.3□□□□□ -0.92
TRIM40-208ENST00000489892 SSMEM1Q8WWF3 244 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 BTF3L4Q96K17 158 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 TMEM68Q96MH6 324 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 RBM14Q96PK6 669 aaKnown RBP9.3□□□□□ -0.92
TRIM40-208ENST00000489892 SLC39A9Q9NUM3 307 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 GNG13Q9P2W3 67 aa9.3□□□□□ -0.92
TRIM40-208ENST00000489892 A0A1B0GV50 99 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 PMS2P5A8MQ11 134 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 CLDN34H7C241 214 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 CA2P00918 260 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 OPN1MWP04001 364 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 OPN1MW2P0DN77 364 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 OPN1MW3P0DN78 364 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 ARL16Q0P5N6 197 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 C2orf83Q53S99 150 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 CYP2G1PQ6ZSU1 146 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 FAM24BQ8N5W8 94 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 ZNF114Q8NC26 417 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 SRSF12Q8WXF0 261 aaKnown RBP9.29□□□□□ -0.92
TRIM40-208ENST00000489892 ARPC1AQ92747 370 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 RITA1Q96K30 269 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 C12orf57Q99622 126 aa9.29□□□□□ -0.92
TRIM40-208ENST00000489892 SLC25A33Q9BSK2 321 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms