RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 TMEM230Q96A57 120 aa10.16□□□□□ -0.78
UFD1-209ENST00000489406 LINC00052Q96N35 136 aa10.16□□□□□ -0.78
UFD1-209ENST00000489406 CLUHP3Q96NS8 147 aa10.16□□□□□ -0.78
UFD1-209ENST00000489406 CCL28Q9NRJ3 127 aa10.16□□□□□ -0.78
UFD1-209ENST00000489406 ORC6Q9Y5N6 252 aa10.16□□□□□ -0.78
UFD1-209ENST00000489406 PLAC8L1A1L4L8 177 aa10.15□□□□□ -0.78
UFD1-209ENST00000489406 NPIPB6E9PJ23 425 aa10.15□□□□□ -0.78
UFD1-209ENST00000489406 MYL12AP19105 171 aa10.15□□□□□ -0.78
UFD1-209ENST00000489406 AZU1P20160 251 aa10.15□□□□□ -0.78
UFD1-209ENST00000489406 RORCP51449 518 aa10.15□□□□□ -0.78
UFD1-209ENST00000489406 SMN1Q16637 294 aaKnown RBP10.15□□□□□ -0.78
UFD1-209ENST00000489406 FOXI2Q6ZQN5 318 aa10.15□□□□□ -0.78
UFD1-209ENST00000489406 PHYHIPQ92561 330 aa10.15□□□□□ -0.78
UFD1-209ENST00000489406 PLGRKTQ9HBL7 147 aa10.15□□□□□ -0.78
UFD1-209ENST00000489406 U3KQE9 123 aa10.15□□□□□ -0.78
UFD1-209ENST00000489406 DENRO43583 198 aaKnown RBP10.14□□□□□ -0.79
UFD1-209ENST00000489406 CALB2P22676 271 aa10.14□□□□□ -0.79
UFD1-209ENST00000489406 FAM78BQ5VT40 261 aa10.14□□□□□ -0.79
UFD1-209ENST00000489406 CADM3Q8N126 398 aa10.14□□□□□ -0.79
UFD1-209ENST00000489406 ZNF485Q8NCK3 441 aa10.14□□□□□ -0.79
UFD1-209ENST00000489406 APH1BQ8WW43 257 aa10.14□□□□□ -0.79
UFD1-209ENST00000489406 IGF2BP2-AS1Q96M15 143 aa10.14□□□□□ -0.79
UFD1-209ENST00000489406 ZNF701M0R085 212 aaPredicted RBP10.13□□□□□ -0.79
UFD1-209ENST00000489406 MFNGO00587 321 aa10.13□□□□□ -0.79
UFD1-209ENST00000489406 NXPH4O95158 308 aa10.13□□□□□ -0.79
UFD1-209ENST00000489406 ALPLP05186 524 aa10.13□□□□□ -0.79
UFD1-209ENST00000489406 CTXN2P0C2S0 81 aa10.13□□□□□ -0.79
UFD1-209ENST00000489406 CLDN12P56749 244 aa10.13□□□□□ -0.79
UFD1-209ENST00000489406 ZNF79Q15937 498 aa10.13□□□□□ -0.79
UFD1-209ENST00000489406 Q6ZSA8 131 aa10.13□□□□□ -0.79
UFD1-209ENST00000489406 TPRA1Q86W33 373 aa10.13□□□□□ -0.79
UFD1-209ENST00000489406 PLEKHA2Q9HB19 425 aa10.13□□□□□ -0.79
UFD1-209ENST00000489406 SCPEP1Q9HB40 452 aa10.13□□□□□ -0.79
UFD1-209ENST00000489406 DBX1A6NMT0 343 aa10.12□□□□□ -0.79
UFD1-209ENST00000489406 F6UB75 175 aa10.12□□□□□ -0.79
UFD1-209ENST00000489406 RS1O15537 224 aa10.12□□□□□ -0.79
UFD1-209ENST00000489406 SNAPC5O75971 98 aa10.12□□□□□ -0.79
UFD1-209ENST00000489406 HOXA5P20719 270 aa10.12□□□□□ -0.79
UFD1-209ENST00000489406 TSPOP30536 169 aa10.12□□□□□ -0.79
UFD1-209ENST00000489406 ERVK-16P61578 105 aa10.12□□□□□ -0.79
UFD1-209ENST00000489406 OR13F1Q8NGS4 319 aa10.12□□□□□ -0.79
UFD1-209ENST00000489406 SECTM1Q8WVN6 248 aa10.12□□□□□ -0.79
UFD1-209ENST00000489406 ABHD1Q96SE0 405 aa10.12□□□□□ -0.79
UFD1-209ENST00000489406 DIMT1Q9UNQ2 313 aaKnown RBP10.12□□□□□ -0.79
UFD1-209ENST00000489406 AP4S1Q9Y587 144 aa10.12□□□□□ -0.79
UFD1-209ENST00000489406 MARCH11A6NNE9 402 aa10.11□□□□□ -0.79
UFD1-209ENST00000489406 SLC17A2O00624 439 aa10.11□□□□□ -0.79
UFD1-209ENST00000489406 CATR1Q13166 79 aa10.11□□□□□ -0.79
UFD1-209ENST00000489406 C2orf76Q3KRA6 126 aa10.11□□□□□ -0.79
UFD1-209ENST00000489406 SIGLEC15Q6ZMC9 328 aa10.11□□□□□ -0.79
UFD1-209ENST00000489406 OR51H1Q8NH63 302 aa10.11□□□□□ -0.79
UFD1-209ENST00000489406 GFI1Q99684 422 aa10.11□□□□□ -0.79
UFD1-209ENST00000489406 MSRB1Q9NZV6 116 aa10.11□□□□□ -0.79
UFD1-209ENST00000489406 ELF5Q9UKW6 265 aaPredicted RBP10.11□□□□□ -0.79
UFD1-209ENST00000489406 CD1AP06126 327 aa10.1□□□□□ -0.79
UFD1-209ENST00000489406 HNRNPCP07910 306 aaKnown RBP eCLIP10.1□□□□□ -0.79
UFD1-209ENST00000489406 HIST1H1DP16402 221 aaKnown RBP10.1□□□□□ -0.79
UFD1-209ENST00000489406 GYS2P54840 703 aa10.1□□□□□ -0.79
UFD1-209ENST00000489406 RAB11BQ15907 218 aa10.1□□□□□ -0.79
UFD1-209ENST00000489406 SCXQ7RTU7 201 aa10.1□□□□□ -0.79
UFD1-209ENST00000489406 OR10R2Q8NGX6 335 aa10.1□□□□□ -0.79
UFD1-209ENST00000489406 FAM3DQ96BQ1 224 aa10.1□□□□□ -0.79
UFD1-209ENST00000489406 CENPNQ96H22 339 aaPredicted RBP10.1□□□□□ -0.79
UFD1-209ENST00000489406 COMMD9Q9P000 198 aa10.1□□□□□ -0.79
UFD1-209ENST00000489406 A0A096LPF7 62 aa10.09□□□□□ -0.79
UFD1-209ENST00000489406 LRCOL1A6NCL2 159 aa10.09□□□□□ -0.79
UFD1-209ENST00000489406 H3BNG1 76 aa10.09□□□□□ -0.79
UFD1-209ENST00000489406 EI24O14681 340 aa10.09□□□□□ -0.79
UFD1-209ENST00000489406 KRASP01116 189 aa10.09□□□□□ -0.79
UFD1-209ENST00000489406 GADD45AP24522 165 aa10.09□□□□□ -0.79
UFD1-209ENST00000489406 HNRNPA3P51991 378 aaKnown RBP10.09□□□□□ -0.79
UFD1-209ENST00000489406 PAX9P55771 341 aa10.09□□□□□ -0.79
UFD1-209ENST00000489406 HSD17B12Q53GQ0 312 aa10.09□□□□□ -0.79
UFD1-209ENST00000489406 EBLN2Q6P2I7 272 aa10.09□□□□□ -0.79
UFD1-209ENST00000489406 FKBP11Q9NYL4 201 aa10.09□□□□□ -0.79
UFD1-209ENST00000489406 MRPL36Q9P0J6 103 aaKnown RBP10.09□□□□□ -0.79
UFD1-209ENST00000489406 PRNDQ9UKY0 176 aa10.09□□□□□ -0.79
UFD1-209ENST00000489406 TRAV9-2A0A087WT02 112 aa10.08□□□□□ -0.8
UFD1-209ENST00000489406 TMEM272A0A1B0GTI8 110 aa10.08□□□□□ -0.8
UFD1-209ENST00000489406 FCGR1AP12314 374 aa10.08□□□□□ -0.8
UFD1-209ENST00000489406 TIGITQ495A1 244 aa10.08□□□□□ -0.8
UFD1-209ENST00000489406 SPATA31B1PQ5VZV4 182 aa10.08□□□□□ -0.8
UFD1-209ENST00000489406 Q8N814 137 aa10.08□□□□□ -0.8
UFD1-209ENST00000489406 OR10J6PQ8NGY7 276 aa10.08□□□□□ -0.8
UFD1-209ENST00000489406 COQ8AQ8NI60 647 aa10.08□□□□□ -0.8
UFD1-209ENST00000489406 LGALS14Q8TCE9 139 aa10.08□□□□□ -0.8
UFD1-209ENST00000489406 WDR12Q9GZL7 423 aaKnown RBP10.08□□□□□ -0.8
UFD1-209ENST00000489406 NOP10Q9NPE3 64 aaKnown RBP10.08□□□□□ -0.8
UFD1-209ENST00000489406 AK6Q9Y3D8 172 aaKnown RBP10.08□□□□□ -0.8
UFD1-209ENST00000489406 TIMM8BQ9Y5J9 83 aaPredicted RBP10.08□□□□□ -0.8
UFD1-209ENST00000489406 CLN5O75503 358 aa10.07□□□□□ -0.8
UFD1-209ENST00000489406 WBP4O75554 376 aaKnown RBP10.07□□□□□ -0.8
UFD1-209ENST00000489406 INSP01308 110 aa10.07□□□□□ -0.8
UFD1-209ENST00000489406 DTYMKP23919 212 aa10.07□□□□□ -0.8
UFD1-209ENST00000489406 G6PCP35575 357 aa10.07□□□□□ -0.8
UFD1-209ENST00000489406 ID1P41134 155 aa10.07□□□□□ -0.8
UFD1-209ENST00000489406 LELP1Q5T871 98 aa10.07□□□□□ -0.8
UFD1-209ENST00000489406 CNIH2Q6PI25 160 aa10.07□□□□□ -0.8
UFD1-209ENST00000489406 TMED4Q7Z7H5 227 aa10.07□□□□□ -0.8
UFD1-209ENST00000489406 ZBTB34Q8NCN2 500 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms